Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01066 ATGAAGATTGCTGGTTTCTCTGATTGTCCTGCATGTTGTTGTTCTCTTGTTTTGTTGCAGAAAGTGGTGTTGAAATTGGATTTACACAATGACAAAGCAAAGCAGAAAGCCATGAAATCCGTTTCTAGTCTATCAGGCATCGATTCCATCTCCATGGACATGAAGGAGAAGAAACTGACTGTAGTGGGTGACATAGACCCTGTGAGTGTGGTGAGCAAATTGAGAAAAACATGGCACACGGAAATTGTAAGTGTTGGGCCGGCAAAAGAGCCAGAGAAGAAGAAAGATGATGGGAAAAAAGATGATGACAAGAAGAAAGATCCAAACCAACAAATTGAGGAGCTTGTCAAGCTCTACAAATCATACAACCCCCACATGACCACATACTACTATGTTCAGAGTGCTGAAGAGAACCCTAATGCTTGGTTGCTTCAACCACCCAAGCATCAAGTAGGTCCTGAAGCTAGTGACTCTTCCAGTGCATTAGGAGCTATATATGTAAAATCCACTGAAGCAGAGCATTGCATTATTCTAGTATATGCAATTGAAGTGGTTATTGATGACATGGAAGTTGCTTAA 579 0.4128 MKIAGFSDCPACCCSLVLLQKVVLKLDLHNDKAKQKAMKSVSSLSGIDSISMDMKEKKLTVVGDIDPVSVVSKLRKTWHTEIVSVGPAKEPEKKKDDGKKDDDKKKDPNQQIEELVKLYKSYNPHMTTYYYVQSAEENPNAWLLQPPKHQVGPEASDSSSALGAIYVKSTEAEHCIILVYAIEVVIDDMEVA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01066 192 Gene3D - 18 90 - -
Spst3g01066 192 MobiDBLite consensus disorder prediction 86 110 - -
Spst3g01066 192 Pfam Heavy-metal-associated domain 27 79 IPR006121 GO:0046872
Spst3g01066 192 MobiDBLite consensus disorder prediction 85 110 - -
Spst3g01066 192 ProSiteProfiles Heavy-metal-associated domain profile. 19 86 IPR006121 GO:0046872
Spst3g01066 192 SUPERFAMILY HMA, heavy metal-associated domain 19 77 IPR036163 GO:0046872
Spst3g01066 192 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 20 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01066 Spst-Chr3 14012654 14017914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01066 - - gmx:100527826 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01066 3 14012654 14017914 Spst3g01066 3 14012654 14017914 ECH