Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01061 ATGAAGTGCAGATCCGTGGCGTGCATATGGTCCGGCACGCCGTTCCCTCACCGCGTCACCGCCGTTGCCACTTTGGCGGAACCACGGACGTCGACCTTTTATACCGCTGGATCCGATGGTTCCGTCGTCTGGTGGACCCTCTCCAGTTCCACTTCCACACCGCAAGTTAAGGCTGTGGGCGTGTTGTGTGGTCACGCCGCACCGGTTACCGATCTTGCCGTTTGTAGGCCCGTTGCAGACGCGGAAAACTGTTACACTTCGAGTGCAAGTAAGTTCAGTGCGTTGATAAGTGCGTGTTGTGATGGTTTTCTGTGTGTGTGGAGCAAAAACAGTGGCCATTGCCGGTGCCGGAGGAAATTGCCGCCTTGGGTTGGGACTCCTCGCTTAATTAGAACCTTGCCTTCGACACCGAGATATGTGTGTATAGCTTGTTCCTTAGAGGGGAATGAAGGAGTAATTGATAAAGAAACTCAGCCTAGGAAGCCTCCTAAGTGCACTATTCTTATTGTGGACTCCTATTCGCTTTCCATTACTCAAACTGTGTTTCATGGAAGTCTATCCATTGGTCCAATTAGGTTTATGGAACTGGTCTTGGATGATGACGAGAAGAGGAACTCCGTGTTTGTGGTTGATTCGGCTGGGAGGCAGCAGATGATTTTGATATCGGAGGATCGAGGGGAGAGCTTGGCGGGTTCACTTGGAGATAAAGGTCAATTAGAGAGCTCTTTTTGCGATGAGGGATTGAGTGGTGTGGAGCAAGTTGTTTCGGTTAAAACGTATGGGAATGTTGTTGCTTTAGTATTGGAAAATCGGTGTGTGTTTAGGTTGTTGAATGGTAATAGTGCGATTGGAGAAGTTTCTTTTGTGGACAGTTTAGTTAGTTTGGATCAGGGTTCTACCCAAATACATGCTATTGGTGGCATTTTTCTTGAAAACTCTGACGTGGGGAATGTGTGCAATAGCAATGAATATGGAAACTCGATTACAGTACGATTTGTTGTGTGGAATAATGTAGGTTATGCAGTTATATATAATGTGTTGTATCAGAAGGGTGTTTTCCAATGTGAACCTCTTTCTGAGATTCCTGGTACACGTTATCAACCTGATATGGGATTATCTGTTTTTTTTCAACAAGTAAATCAATATCTTGTATGCATCAAGTCAATTTGCTTAACTTATGAGGAGCCTTTACTATGGAGACCACTTGCCACAATCTGGTCATTGAATGATTTTGATGATGAACCTGGTAGATTGTATCGTCAATGCAGAATGATCGGTGATGGTGTATCTTTCACCGACTGGTCTGAGAAATCGACTCAGCTCAAGGGGCTAGATGGTCTTGAGACTACACCTACTTTTGGTTTGAGTCCAAGTTCTGATAATATAGAAAGCGAACATGTAGATATTGGAAGTAATTATTATGCTTACAAGGGGAAGGTCGTTTCTTCTTCCATGATTATCTCGGAAAACCTCTTAACTCCTTATGCTGTTGTATATGGTTTTTTGAGTGGAGATATAGAGGTTGTAAGATTTGATCTGTTTCAAGGGATTTGCTTGGATGATGCAAGTTCCAGTCCTGATGAAAAGCCAACTGCATGCAAACAGTACTTCTCTGGACATACAGGTGCTGTACTTTGTTTAGCAGCACATCAAATGAGGGGTAATGCCAAAAGCTGGACTTTTAAGCGGGTTTTGGTGTCTGGAAGTATGGATTGCACCATCCGTATATGGGATCTTGACATTGGAAGTCTTATCATGGTAATGCATCATCATGTGGCTCCTGTGCGTCAAATTATTCTTCCTCCATCTTTGACTGTGTATCCATGGAGTGATTGCTTCCTTTCAGTCGGAGAGGATGCATGTGTTGCTCTTATTTCTCTAGAAACTCTGCGACTGGAGAGAATCTTTCCTGGACACTTGAACTATCCGTCTAAAGTTTTATGGGACGTAGAAAGAGGTTATATTTCCTGTCTCTGTCAAACAGGTTGTGGAACTTCTCATGTTACTGATGCTACTGATGTATTATACATTTGGGATGTAAAGACAGGTTCACGTGAACGAGTCCTACTTGGGACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAGCATCAGCATGAATTCCATATCTGGTACATTGCTGAATGGAAATACATCAGTCTCTTCCTTACACCTGCCAATAGTTGATGATGCAAGGTTCTCTAACTCCCCCTTAAATCGTTCAGACAACTTGCTTACTTCATCAAGGTCATCACCAAATATTTCAAATATGACTGAGCTGAATTCTTCCAAAACAAATGCAGGTAAAGGAATTTCAGTGAAGCCAGATTCGTCCTCTCTGACTGGTCTTAATAGCAAGCTTCCTATCAAATGCTCTTGCCCTTTCCCAGGGATTGTGTCTCTGTGTTTTGATCTTGCATCATTGATGTTCTCATATAAAAAAAATGAGTCCATTGAAAATGGTGGAGGCAAGCCAGTGAATATCAATTTGATGCAGCAGGGAGTCGAGGTGCAAAATCCTAGATACCATAATTCAGAAATTTTAGAGGGCCATGACTGGGTTACTCTATTTGAAGAATACTTACTTCGATATAGCTTGTCATTTCTACATTCGTGGAATGTAGACGTAGAGCTTGATAATTTGTTGATAAGTGACATGAAGCTGAGGAGACCAAAAAATTTTATACTAGCTTCTGGTCTGCAGGGGGATAAAGGGTCATTGACGTTAACATTTCCTGCTCAGAGTGCTACTCTTGAGCTGTGGAAATCATCATCTGAGTTTTGTGCAATGAGGTCATTGACAATGGTGTCGCTTGCCCAACGTTTGATTAGCTTGTCTCATTCTGGTTCAGCAGCCAGCAGTGCTTTAGCAGCCTTTTATACTCGGAATTTCCTGGAAAATTTTCCAGACGTGAAGCCACCATCATTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCACGCTCTATATTTCATTGTGCTGCCTCTCATGTTATTCCTCTACCTCTATGCAATTTAAAACATACTGAGTCAAACAATACGAGTTCTCCTAAGGCAGAAAAACAAGGAATTTCCCATGATGAGGAATCCAAGATACTTGCTTGGCTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGTGGAACTAGTCAGGATGCAATGACATCTCACATTATTGTTGCTGGTGCACTGGCTATCTGGTATCCTAGTCTTGTAAAGCCAAGTGTTGCCAGGCTAGTTGTTCATCCGTTAATGAAGTTGGCTATGTCTATGAACGAGAAGTACAGCTCCACTGCTGCTGAGCTTCTTGCAGAGGGCATGGAAAGTACATGGAAAGAATGCATTGTATCTGAGATTCCTCATTTGATTGGGGATATTTTTTTCCAAGTAGAGTTGAGCGGCCCATCTTCCAAGTCAGTGCCCGAAGTTTCAGATGCATCTTTTTCTATTAAAAAGAGTTTGGTGGAGGTTCTTCTTCCAAGCTTGGCTATGGCTGACATAATAGGCTTTTTGTCTGTGATTGAAAGCCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACATGGTGTCCTTGTTGACTCTTATAAGGATCATGCGTGGTTCTCCAAAGAATTTGGCTCAATACCTTGACAAGACTATAGATCCTAGCAACTCAGTCATGCGGAAGGCTTGCTTCCAGAGTTCAATGACAACTTTCAAGGAACTTGTACGTGTATATCCCATGGTAGCTGTCAATGATTCATGTACCAAATTAGCAGTTGGAGATGTGATTGGAGAAATTAACAATGCAAGCATCAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAACTCTACTCCCAGCAGCAACATTAGGGACAATGTTGACCACTGCCATTTCAGCACTGAGTTTTTCACCAGATGGAGAGGCTGCTGAACTTTCAGTTGAGGCAATCATGAAACGACTCTTTAGCTTCTATAGCCAGCCCAAACTAGCAACAGAAGATTTTGTATTTGCCCGTACTAGCATACTGTTTAAAGAGGTATTCGTTGGAGATCTTGTAATCGGAGACACCGCCCTTTGA 4131 0.4265 MKCRSVACIWSGTPFPHRVTAVATLAEPRTSTFYTAGSDGSVVWWTLSSSTSTPQVKAVGVLCGHAAPVTDLAVCRPVADAENCYTSSASKFSALISACCDGFLCVWSKNSGHCRCRRKLPPWVGTPRLIRTLPSTPRYVCIACSLEGNEGVIDKETQPRKPPKCTILIVDSYSLSITQTVFHGSLSIGPIRFMELVLDDDEKRNSVFVVDSAGRQQMILISEDRGESLAGSLGDKGQLESSFCDEGLSGVEQVVSVKTYGNVVALVLENRCVFRLLNGNSAIGEVSFVDSLVSLDQGSTQIHAIGGIFLENSDVGNVCNSNEYGNSITVRFVVWNNVGYAVIYNVLYQKGVFQCEPLSEIPGTRYQPDMGLSVFFQQVNQYLVCIKSICLTYEEPLLWRPLATIWSLNDFDDEPGRLYRQCRMIGDGVSFTDWSEKSTQLKGLDGLETTPTFGLSPSSDNIESEHVDIGSNYYAYKGKVVSSSMIISENLLTPYAVVYGFLSGDIEVVRFDLFQGICLDDASSSPDEKPTACKQYFSGHTGAVLCLAAHQMRGNAKSWTFKRVLVSGSMDCTIRIWDLDIGSLIMVMHHHVAPVRQIILPPSLTVYPWSDCFLSVGEDACVALISLETLRLERIFPGHLNYPSKVLWDVERGYISCLCQTGCGTSHVTDATDVLYIWDVKTGSRERVLLGTAAHSMFDHFCKSISMNSISGTLLNGNTSVSSLHLPIVDDARFSNSPLNRSDNLLTSSRSSPNISNMTELNSSKTNAGKGISVKPDSSSLTGLNSKLPIKCSCPFPGIVSLCFDLASLMFSYKKNESIENGGGKPVNINLMQQGVEVQNPRYHNSEILEGHDWVTLFEEYLLRYSLSFLHSWNVDVELDNLLISDMKLRRPKNFILASGLQGDKGSLTLTFPAQSATLELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSAASSALAAFYTRNFLENFPDVKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHVIPLPLCNLKHTESNNTSSPKAEKQGISHDEESKILAWLESFEVQDWISCVGGTSQDAMTSHIIVAGALAIWYPSLVKPSVARLVVHPLMKLAMSMNEKYSSTAAELLAEGMESTWKECIVSEIPHLIGDIFFQVELSGPSSKSVPEVSDASFSIKKSLVEVLLPSLAMADIIGFLSVIESQIWSTASDSPVHMVSLLTLIRIMRGSPKNLAQYLDKTIDPSNSVMRKACFQSSMTTFKELVRVYPMVAVNDSCTKLAVGDVIGEINNASIRVYDMQSVTMIKVLDASGPPGLPTLLPAATLGTMLTTAISALSFSPDGEAAELSVEAIMKRLFSFYSQPKLATEDFVFARTSILFKEVFVGDLVIGDTAL 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01061 1376 ProSitePatterns Trp-Asp (WD) repeats signature. 565 579 IPR019775 -
Spst3g01061 1376 SUPERFAMILY ARM repeat 937 1231 IPR016024 -
Spst3g01061 1376 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1325 - -
Spst3g01061 1376 Gene3D - 515 779 IPR015943 GO:0005515
Spst3g01061 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 565 587 IPR001680 GO:0005515
Spst3g01061 1376 SUPERFAMILY WD40 repeat-like 14 691 IPR036322 GO:0005515
Spst3g01061 1376 Gene3D - 4 193 IPR015943 GO:0005515
Spst3g01061 1376 MobiDBLite consensus disorder prediction 743 774 - -
Spst3g01061 1376 SMART WD40_4 629 679 IPR001680 GO:0005515
Spst3g01061 1376 SMART WD40_4 530 578 IPR001680 GO:0005515
Spst3g01061 1376 SMART WD40_4 5 46 IPR001680 GO:0005515
Spst3g01061 1376 SMART WD40_4 55 108 IPR001680 GO:0005515
Spst3g01061 1376 Pfam WD domain, G-beta repeat 533 578 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01061 K24738 - gmx:100818675 2260.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01061 3 13959785 13970911 Spst3g01061 3 13959785 13970911 ECH