Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01056 ATGGCTCAGAGTCCTGATCAGCAGATCAAGCCCTTAGCTCCATTCATATCATCAACCCACTTCAACAGACAAGAAGATCAAGATTACACATTCGAACAGAAAAAAAACATTCGCCTAAGAAAGTTCATTCTGTGCTTCGGTTGTGCCACTGCAATTGTTGTGTTACTTGTTGTCATAGTATTGGTCTTGGGCTTCACCGTTTACAGTGTCAAAGAACCCGAGGTGAGGATGAACAGGGTTACCCTTCTCAGTGGAACTTTTGCCAACGGTGCTACTGACAACGTTACACTTCTTGCTGACATCTCTGTGAAGAATCGAAACGCTTTTATCTTCAGGTTTGGAAACGCCACCACTGATGTTTACTATGATGGTGCGGGAATAGGTGTGGGTGCATCTCCATCAGGGAAAGCCAAGGCCAGAAGGACCATAAGGGTCAACACCACCATAGAGATTATGGCAAAGAAGCTTTTGGAGAATCCAAATATGGTTACTGACCTAAAGGATCAAGCTTTTAATGTCAGCAGCTATACCAGGATCCATGGTAAGGTCAAAATACTTAACATTTTTCCCAAGAAAGTTGTGGTTAAGATGAATTGCACAATTGCATACAACATCACCACTGGGTTGGTCACAAATGGTGACAATTGTCTTGGAACCGTTGATATTTAG 669 0.4275 MAQSPDQQIKPLAPFISSTHFNRQEDQDYTFEQKKNIRLRKFILCFGCATAIVVLLVVIVLVLGFTVYSVKEPEVRMNRVTLLSGTFANGATDNVTLLADISVKNRNAFIFRFGNATTDVYYDGAGIGVGASPSGKAKARRTIRVNTTIEIMAKKLLENPNMVTDLKDQAFNVSSYTRIHGKVKILNIFPKKVVVKMNCTIAYNITTGLVTNGDNCLGTVDI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01056 222 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 205 - -
Spst3g01056 222 SUPERFAMILY LEA14-like 53 153 - -
Spst3g01056 222 Pfam Late embryogenesis abundant protein 101 200 IPR004864 -
Spst3g01056 222 Gene3D - 60 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01056 Spst-Chr3 13894103 13894771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01056 - - gmx:100527705 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01056 3 13894103 13894771 Spst3g01056 3 13894103 13894771 ECH