Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01039 ATGGAGTCGGCTGCTCTTTCGCGCATAGGCCTGGCGGGCCTGGCCGTGATGGGCCAGAACCTTGCCCTAAACATCGCGGAGAAGGGCTTTCCCATCTCCGTCTACAACCGTACGGCCTCCAAAGTCGACGAGACAGTAGATCGGGCCCACAACGAGGGTTCCCTTCCGCTCACCGGCCAATACACTCCTCGCGACTTCGTCCTGTCCCTGCAACGTCCCAGATCCGTCATCATCCTCGTCAAGGCCGGTGCCCCCGTCGACCAAACCATTGCGGCTCTCTCCGACCACCTCGAGCCCGGCGACTGCATCATCGACGGCGGCAACGAGTGGTACGAGAACACGGAACGCCGCATGAGCCACGTCGCCGAGAAAGGCCTCCTCTACCTCGGCATGGGCGTCTCTGGTGGCGAAGACGGCGCGCGCCATGGCCCATCCCTCATGCCCGGCGGCTCCCACACTGCCTACACTAACGTCCAGGATATCCTCCACAAAATCGCCGCGCAGGTCGAGGATGGCCCCTGCGTCACCTACATCGGCGAGGGAGGCTCTGGAAACTTCGTGAAGATGGTCCACAACGGAATCGAATACGGAGATATGCAACTCATCTCGGAGGCTTACGACGTGTTGAAACACGTCGGTGGCTTGTCGAATTCTGAGCTTGCGGATATCTTCGCAGAGTGGAACAGAGGGGAGCTTGAGAGTTTCTTGATTGAAATCACTGCGGATATTTTTAAAGTGAAGGATGAGGATGGTGAAGGGTTTTTGGTGGATAAGATTTTGGACAAGACAGGGATGAAGGGGACTGGGAAATGGACGGTGCAGCAGGCGGCGGAGCTATCGATAGCGGCACCGACGATTGCGGCGTCGTTGGATTGCCGGTACTTGAGTGGGTTGAAGGAAGAGAGGGAGAGTGCCGCGACGGTGTTGAAGGAGGCGGGGTTGACTGATGATTTAGGGAGAATTGGTGTGAGTGGAGTGGATAAAAAGAGGTTGATTGATGATGTGAGACAGGCTTTGTATGCTTCAAAGATTTGTAGCTATGCTCAGGGGATGAATTTGTTGAGGGCCAAGAGTAATGAGAAAGGTTGGAACTTGAATTTGGGGGAATTGGCTAGAATTTGGAAGGGAGGGTGCATCATAAGGGCAGTGTTCTTGGACAGGATCAAGAAAGCTTATCAAAGGAACCCTAATTTGGCTAGTTTGATAGTGGACCCGGAGTTTGCAAGGGAAATGGTTCAGAGGCAGGCTGCGTGGAGACGGGTGGTGGGGTTGGCGGTTTCGGCTGGGATTAGCACTCCCGGAATGTGTGCTAGTCTTGCTTACTTTGATACCTATAGGAGGGCGAGACTTCCGGCGAACCTTGTTCAGGCTCAGAGGGACTTGTTTGGGGCGCACACTTATGAGAGGGTTGATCGCCCTGGGGCTTTCCATACTGAGTGGACAAAGCTTGCACGCAAAAGTGGGACTGGAGTTGGTGCTCTCAATTGA 1488 0.5504 MESAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTASKVDETVDRAHNEGSLPLTGQYTPRDFVLSLQRPRSVIILVKAGAPVDQTIAALSDHLEPGDCIIDGGNEWYENTERRMSHVAEKGLLYLGMGVSGGEDGARHGPSLMPGGSHTAYTNVQDILHKIAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELADIFAEWNRGELESFLIEITADIFKVKDEDGEGFLVDKILDKTGMKGTGKWTVQQAAELSIAAPTIAASLDCRYLSGLKEERESAATVLKEAGLTDDLGRIGVSGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSNEKGWNLNLGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAREMVQRQAAWRRVVGLAVSAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERVDRPGAFHTEWTKLARKSGTGVGALN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01039 495 NCBIfam decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 9 481 IPR006113 GO:0004616|GO:0006098
Spst3g01039 495 Gene3D - 5 185 - -
Spst3g01039 495 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 480 IPR006114 GO:0004616|GO:0006098
Spst3g01039 495 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 449 482 - -
Spst3g01039 495 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 482 IPR008927 -
Spst3g01039 495 Gene3D - 449 482 - -
Spst3g01039 495 PIRSF 6PGD 1 488 IPR006113 GO:0004616|GO:0006098
Spst3g01039 495 SMART 6PGD_2 184 481 IPR006114 GO:0004616|GO:0006098
Spst3g01039 495 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 186 448 - -
Spst3g01039 495 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 6 484 IPR006183 GO:0004616
Spst3g01039 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Spst3g01039 495 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 370 392 IPR006183 GO:0004616
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Spst3g01039 495 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Spst3g01039 495 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 5 185 - -
Spst3g01039 495 Gene3D - 186 448 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01039 Spst-Chr3 13700808 13702295 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01039 K00033 - gmx:100803740 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01039 3 13700808 13702295 Spst3g01039 3 13700808 13702295 ECH