Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01025 ATGGTGAAGCATCGCCTTAGAGAGTCTATTAAATCTTTGTTTGGAAGTCACATTGACCCTAATAAACAAGAGCAGCTCCATGTAGCTAAAGCAGATACTGAAGATAAAGTGAAAGAGATATTGAAACTTATTAAAGATGACAACCTTGAAGAGGATGGTACCCCAGTACAACTTTCTAAGAGGGAACCACTTATTGAACTGATTGAAGATTTCCACAGTCAATACCAATCACTGTTTGCACAATATGATAATCTAACAGGTGAGTTAAGGAAAAGGATTAAGGGCAAGCGAGAAAACGAGAGTTCTTCATCCACCTCAGACTCAGATTCTGATTCAGATTATTCTTCAAAGGACAAAGACAACAAAAACGGACGGCTGGAAAATGAATTTCAAAAGACACTCGATGGCTTAAAGCAAGAACTTGAAGTGGTGCATGTCGAAGTAGCTGAATTAAATCGGAAGTTGACAATTTCACATGAAGAAAAGGAGGATCTTAATTCTAAATATCTTGCAGCACTGAGCAAGATACAAGAAGCCGATAAAATTAAGATGGACTTGAAAAGTGATGCTGAAGCATTTGGCACTCAAAGATCAAAACTTTTGGTTGAGAATGCTGAACTGAATCAAAGATTGGAAGACTTAAAGACAGAAAAAGATAGTTTGACCATGGAGAAGGAGACAACTCTCCAACAGATTGAGGAGGAAAAGAAGATCACTGGTAGCCTGAGAACCCTTGTTGATCAACTGAAAGATGAGAAATTAGCACTTGACAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCCATTCTGAAACAGCAGTCGGAACATGCAGAACAGAAAATGGCAGATTTAAGCCACAATCTGAAAGTTGCTGAGGAAGAAAATAAATCTTTAAAAGTGCAACTTTCGCAGGCTTCAAATGAGGTCCAGCTGTCTCACAGTAGAATACAAGAATTTGTAGTTGAATCAAGTCACTTGAAGGAGAAAGTTCATGAGAGTGGTAGGGAAATTTCTGCTTTAACTCAGAGGCATGAAGGGTTTCAGAAAGAATCCTCAAATCGTATCAGGGAACTGCAGACACAAGTCACAAACTTGGAGCTGGAATTAGAATCACTGCAAAACCAGAAAAGAGATATTGAAGAGCAACTGAAGATAAGCACCACTGAAACAAGGGAAATAGGAGAGCACAATTCAGAGCTACAAAACCAAATATCACAACTTGAATTGAAGTCCAGAGAAAGAGAAGAAGAGCTATCTGCTGTGGTGAAGAAACTAGAAGATAATGAGAATGAGTCATCTTTGAAAATGTCAGATTTAACATCTCAGATAAACAAGCTGCTGGCTGATATTGGTACATTACATGCTCAGAAAAATGAACTGGAAGAGCAGATAAATTTTAAAAATAACGAAGCTTCGACTCAAGTTGAAAGCATTACAAATGAGGTGAATGCATTGCAACAAGAAGTGACGTCCCTTCAACACCAGAAATCAGACTTAGAAGTTCAGTTAGCAGAAAAAGTCCATGAAAATTCTGAGAATGTGATTCAAATACAAACTCTGAAAGAGGAAATTGACAGAAAAATGCTAGAACAAGAGAAATTTCTGGAAGAAAGAGAAAATTTAGCGATGCAGCTGAGGACATTAGAACTAGAGATGAACACTGTACAGAACAAAAACAGGGAAGCTGAAGAGCAAATAAGGGCTAAAAGCCAGGAGATCAGTCACGTGAGACAGGAAATGCTGGAGCTATATGACAAAATAGCAGAAATAGAGAAAATATCAACAGATAGAGAAGCAAACTTCTTGATTATCCAGGATAAGTTTAATAGCGCAGAACAGGCAGTTTCAGCTCAAATAACGGCCTCCAGTGAAAAAATTAAGAATCTTGAACATGGTTTGGCATCCCTGCAAAATGAGAAACAAGAATTAGAACATCGGTGTGAAAAGCTGAAGTTGGAGGTGGATTCCATACAGAACCAAAAGAATGACGTTGAAGAACGAATGAGAACTAAAGACAATGAGAACTCTGGACTGAGAGAGGAAAATTTGGGATTGCAGGGGACAATTACTGTGCTGGAGAAGACATTAGCCCAGAAAGAGGCAGAGCTATTCACTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAAGCTGCAGGTCAAGTAACTATCTTCACAGTTCAGATCGATAATCTAAAGCATGATTTGGTTTCCCTGCAGAATGAGAAACAGGAAGTAGAACAGCAGTGTGGAGAGCTGAAGATGGAGCTGGATTCCACACAAAACCAGAAAGTTGAAGTTGAAGAACAGATGAGAGCTAAAGATCAAGAGAACACGGAACTGAGAGAGGAAAATTTGGGATTGCAGGGAAAAATTACAGCACTGCAGAAAACATTAATGGAGAAAGAGGCAGCGCTATCCACTTTACAGGAAAAGCTTCTTGAAAAAGAGAGCAAGGCTTCAGGCCAAATAACTGCCTTCACAGCCCACATTGATAATCTAAAACATGATTTGGTTTCCCTGCAGAATGAGAGACAGGAAGTAGAACAGCAGTGTGAAAAACTGAAGATGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGACCAGATAACAGCTAAAGACCATGAGAACGCCAAACTGAAAGAGGAAATTTTGGGATTGCAGGGAACTATTACTGCACTGGAGAAAAGATTAGCCGAGAAAGAGACAGAGTTATTCACTTTGCAGGAAAAGCTTGACGAAAAAGAGAGTGAGGCTTCCGGGCAAGTAATTGCCTTCACGGCCCAAATTGATAATCTGCAAAAAGACTTACTTTCCTTACAAAAAACAAAAGAAGAATTGGAGCTCCACTATGAAAAAATTAGTGAAGAACATGCAGAAAGCCTTTTAGTGGTAGAGAATGAAAAGAATGACATATCAAGCAGAACTATTGATCTTAAGAGAACAATAAAAGAACGAGAAGATTCATTTCAGAGGCTAAATGAAGAATACAAACACATTGATGGTTTGTTTCAGGAATGCATGGTCAAGCTTGAAGTTGCAGAGAAGAAGATTGAAGAAATGGCAGGAGAGTTTCGTGAAGACATTGAGTTGAAAGATCAGAAGGTAGCTAATTTGGAACATACTGTAGAAGACCTAAAAAGAGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTTGCTTGAGAATGTTCGGATGCTCGAGGTTAGGCTTCGTCTGTCAAACCAGAAGCTCCGGGTCACAGAGCAATTGCTGAGTGAGAAGGAAGAAAGCTTTAGGAAGTCGGAGGAAAAGTTTCAGCAAGATCAGAGAGCACTTGAAGACAGGATTGCTACTTTATCAACAATAATAACCTCCAACAATGAAGCTTTGCATGAAATTGTCTCTAATGTCAAAGAGTGTGTGAACAGTGTCATGAATGGCATAGAAATTGTAAGCTGTCGGGTTTCTGATGACTGCAAAAACTACGAGGAGTGTGTCTCTAACATATCACATGAGCTGGAGGTTGCAAAGGGGCATGTGAGGGAGATGAATAAGGAAAAAGAGCAACTAAAGAGAGACAAAAAGCAGTTGTTGGAGCAGCTGCAGGTTAAAAATGAAGAGGAGGTGGCTTTGAGGAAGACAGTTGAGAAACTTGAGACAAATGCAAGCAAGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTAGTTCAACTTAAGAAGACAATTAGAGAGCTGGAGAAAATGATGAAAGAGAAAGAGGATGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAGGTCATCAGGCAGCTGTGTCTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACATTCTCTGGAAGACTCGCAGGGGCCAGAGAGCAGCATAA 3888 0.3974 MVKHRLRESIKSLFGSHIDPNKQEQLHVAKADTEDKVKEILKLIKDDNLEEDGTPVQLSKREPLIELIEDFHSQYQSLFAQYDNLTGELRKRIKGKRENESSSSTSDSDSDSDYSSKDKDNKNGRLENEFQKTLDGLKQELEVVHVEVAELNRKLTISHEEKEDLNSKYLAALSKIQEADKIKMDLKSDAEAFGTQRSKLLVENAELNQRLEDLKTEKDSLTMEKETTLQQIEEEKKITGSLRTLVDQLKDEKLALDKELEAVTGELSILKQQSEHAEQKMADLSHNLKVAEEENKSLKVQLSQASNEVQLSHSRIQEFVVESSHLKEKVHESGREISALTQRHEGFQKESSNRIRELQTQVTNLELELESLQNQKRDIEEQLKISTTETREIGEHNSELQNQISQLELKSREREEELSAVVKKLEDNENESSLKMSDLTSQINKLLADIGTLHAQKNELEEQINFKNNEASTQVESITNEVNALQQEVTSLQHQKSDLEVQLAEKVHENSENVIQIQTLKEEIDRKMLEQEKFLEERENLAMQLRTLELEMNTVQNKNREAEEQIRAKSQEISHVRQEMLELYDKIAEIEKISTDREANFLIIQDKFNSAEQAVSAQITASSEKIKNLEHGLASLQNEKQELEHRCEKLKLEVDSIQNQKNDVEERMRTKDNENSGLREENLGLQGTITVLEKTLAQKEAELFTLQEKLHEKESEAAGQVTIFTVQIDNLKHDLVSLQNEKQEVEQQCGELKMELDSTQNQKVEVEEQMRAKDQENTELREENLGLQGKITALQKTLMEKEAALSTLQEKLLEKESKASGQITAFTAHIDNLKHDLVSLQNERQEVEQQCEKLKMELDSSQNQKGEVEDQITAKDHENAKLKEEILGLQGTITALEKRLAEKETELFTLQEKLDEKESEASGQVIAFTAQIDNLQKDLLSLQKTKEELELHYEKISEEHAESLLVVENEKNDISSRTIDLKRTIKEREDSFQRLNEEYKHIDGLFQECMVKLEVAEKKIEEMAGEFREDIELKDQKVANLEHTVEDLKRDLEEKGDEISTLLENVRMLEVRLRLSNQKLRVTEQLLSEKEESFRKSEEKFQQDQRALEDRIATLSTIITSNNEALHEIVSNVKECVNSVMNGIEIVSCRVSDDCKNYEECVSNISHELEVAKGHVREMNKEKEQLKRDKKQLLEQLQVKNEEEVALRKTVEKLETNASKEESEKMNLTTTVVQLKKTIRELEKMMKEKEDGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDILWKTRRGQRAA 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01025 1295 Coils Coil 246 308 - -
Spst3g01025 1295 Coils Coil 1169 1259 - -
Spst3g01025 1295 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Spst3g01025 1295 Coils Coil 197 231 - -
Spst3g01025 1295 Coils Coil 791 818 - -
Spst3g01025 1295 Coils Coil 348 389 - -
Spst3g01025 1295 Coils Coil 1031 1065 - -
Spst3g01025 1295 MobiDBLite consensus disorder prediction 93 125 - -
Spst3g01025 1295 Coils Coil 134 168 - -
Spst3g01025 1295 Coils Coil 422 502 - -
Spst3g01025 1295 Coils Coil 932 962 - -
Spst3g01025 1295 Coils Coil 517 579 - -
Spst3g01025 1295 Coils Coil 728 783 - -
Spst3g01025 1295 Coils Coil 689 716 - -
Spst3g01025 1295 Coils Coil 397 417 - -
Spst3g01025 1295 MobiDBLite consensus disorder prediction 111 125 - -
Spst3g01025 1295 PANTHER COP1-INTERACTIVE PROTEIN 1 740 854 - -
Spst3g01025 1295 Coils Coil 823 920 - -
Spst3g01025 1295 Coils Coil 619 681 - -
Spst3g01025 1295 Gene3D - 787 971 - -
Spst3g01025 1295 Gene3D - 598 749 - -
Spst3g01025 1295 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01025 - - gmx:100778046 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01025 3 13621778 13625818 Spst3g01025 3 13621778 13625818 ECH
Spst2g00249 2 1930954 1932948 Spst3g01025 3 13621778 13625818 PCT