Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01024 ATGAGGACCGATTATTTGAAGCAGAACTTTCCCTTCACCCACAGAAACCTCTTCCTCAAGTTGCTCCTCACTCTTTTCTTCCTAGGCCTCGCTTTCCGCATTCTCTTCTTTCATTCCCTCTCCCCACAGATTTCCCCTGTTCTCGAATCCCCATTTCCTGAAAAAGTCACATTATCACAACCCCACAACCCACCTCACACTTCAGCTCTTTCACAATCTGTTTCCGAACCTCCACCTGTTCAGGAACGTGCTTCCGAACCTCCACCTGTTCTGGAACATGTTCCCGAACCCCCTCCTGTTGTCGAATTTGTTTCCGAAACTGAAGATCAATTCTCTCCCACAGAATCAGAGAAATGTGATTACTTTAATGGGGATTGGGTCCGGAACCCGTCTGGTCCAGCTTACACCAATGAAAGCTGCAACCTTATTGAATCTCATCAAAATTGCTTGAAGAATGGAAGACCTGATAGAGAGTTTCTGTATTGGAGGTGGGCTCCTAGACAGTGTGATTTGCCTCAGCTTGATCCACAGAGGTTTCTCAACATGATGCGGAACAAAGCCTGGGCATTCATTGGTGATTCCATTTCCCGCAACCATGTGCAATCCCTGCTTTGCCTTCTCTCCAAGGTGGAACAACCTGTCTTAGTCTATCATGACGAGGAATACAAGTGCAAAAGCTGGAACTTTCCCTCATACAACTTCAGTATGTCTGTGATTTGGTCGCCCTTCCTTGTGAAAGCTGCTATTTTTGAAGATATAAATGGAGTTTCGAGTTCTGAAGTTGAGCTACATCTTGACAAACTGGACAGTAAATGGACAGATCAGTACCTTGACTTTGATTACATCATTATTTCAACTGGGAAATGGTTTCTCAAATCTGCAATCTACTATGAGAATGACACCATATTAGGCTGCCACTCCTGTCCTAATAGGAACCTGACAGAGCTGGGGTTTAACTTTGCATTTCGCAAAGCCTTGAAAGCTGTAATGAACTTCATAGTGTCTTCAAATCACAAAGGGATGATATTTTTCAGGACATTCACAGCTGATCATTTTGAAAATGGGGAGTGGTTTAGTGGGGGAACTTGCAATAGAACAGCACCAATTAAAGAAGGGGAGATGGAAATGAAATTTCTGAACCAGATGCTCCGTGACATAGAGTTAGATGAGGTTGGAAAGGCAGTTTCTGAAGCTTCAAAAAATGGGGTGAACTTTAAGCTTGTGGATTTTTCTGCACTTTCACAATTGAGACCTGATGGGCATCCTGGTCCATACAGGCAATTTCAACCATTTGCAAAGGATAAAAATGCTCAAGTTCAGAATGATTGTCTGCATTGGTGCTTACCTGGGCCAATAGATTCTTGGAATGACATAATAATGGAGATGGTTGCAAAGGGGTAA 1401 0.4333 MRTDYLKQNFPFTHRNLFLKLLLTLFFLGLAFRILFFHSLSPQISPVLESPFPEKVTLSQPHNPPHTSALSQSVSEPPPVQERASEPPPVLEHVPEPPPVVEFVSETEDQFSPTESEKCDYFNGDWVRNPSGPAYTNESCNLIESHQNCLKNGRPDREFLYWRWAPRQCDLPQLDPQRFLNMMRNKAWAFIGDSISRNHVQSLLCLLSKVEQPVLVYHDEEYKCKSWNFPSYNFSMSVIWSPFLVKAAIFEDINGVSSSEVELHLDKLDSKWTDQYLDFDYIIISTGKWFLKSAIYYENDTILGCHSCPNRNLTELGFNFAFRKALKAVMNFIVSSNHKGMIFFRTFTADHFENGEWFSGGTCNRTAPIKEGEMEMKFLNQMLRDIELDEVGKAVSEASKNGVNFKLVDFSALSQLRPDGHPGPYRQFQPFAKDKNAQVQNDCLHWCLPGPIDSWNDIIMEMVAKG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01024 466 Pfam PMR5 N terminal Domain 117 170 IPR025846 -
Spst3g01024 466 MobiDBLite consensus disorder prediction 56 79 - -
Spst3g01024 466 MobiDBLite consensus disorder prediction 81 96 - -
Spst3g01024 466 Coils Coil 369 389 - -
Spst3g01024 466 MobiDBLite consensus disorder prediction 54 97 - -
Spst3g01024 466 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 171 462 IPR026057 GO:0016740
Spst3g01024 466 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 46 459 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01024 Spst-Chr3 13593534 13596739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01024 - - gmx:100816814 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01024 3 13593534 13596739 Spst3g01024 3 13593534 13596739 ECH