Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01012 ATGGCGGACGCAGAGGCGCAGTCTCGATCTCTTGCCTTCTCCTCTCGCCGAGTCTCTCCTCCACCGCCTCGTCGACCGCCGGTCTTCAAACACAGCGTCGAAAAGGTTATCTTTAGAGAGTACAGAATCGTGGACGCGGAGTGGATGGCGTATTTGGGAGCTTTTCGTCACTTGCGCTACTTGAACCTCGCCGATTGTTATCGAGTCTCCTCTTCAGCTCTTTGGCCAATTGCAGGAATGACTACTCTTCGTGAGTTGGATCTGTCTAGATGCGGCAGGATCAATGATGCCGGAATTAACCATCTTCTCTCCGTTCCTAATCTGGAGAAGTTGCACATTTCAGAAACTGACGTCACTGCCAAGGGTGTCAAGCTTCTCGCCTCTCTTGAAAACTTGTCTCTTCTTGACTTAGGTGGCTTGCCCGTAGATGACGAGTCGTTAACTTCGTTACAGCAGTTCATTTGTTTGCAGATGGGGTCCAATGTATTACCTTTCGGACTACAGTATATTGATCTCTGGGGTAGTAAAATATCAAATAAAGGTGCTGCTGTTCTCAATATGTTGCCCAAGTTGACCTATCTCAATCTTGGTTGGACCAGTGTCACAAAATTGCCTAAATTATCATCTCTTGAATACCTGGACATGAGTAACTGTACTGTTGAATCTGTACTTGAAGATGATAAATCTCCTTTGTCAAAGCTTATTTTCACTGGGGCTACATTCCTGAATGAAGCTGGAATCTTCCTGTATGCAAATACAAATCTCCTATCCTTTTTGGATTTATCTTATTCGAGCCTGCGCAAATTCTTCTTCTTAAGAAAAATGAAAGTAGTAGAACATCTCAATCTCTGCGCATGCATGATGGGGGATGATTCAATTAAGATGCTTGCATGCGCTAGTGGTAACTTGAAAAGTCTGAATCTGAGCCGTACCAGGGTTAGTTCTGCTGGATTAGGGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTGTCATTATCTCAGACTCCAGTGGATGACACTGGGATCTCATTTATCAGTATGATGCCTTCACTAAAGGACCTTGACCTGAGCAATACAAACATTAAAGGTTTTCTGCACCAAGGAAGGATTGATGTGGACTCTCCACTCTCCCTAATGGCTTTGAAAAATCTTAAATTAGAAAGGTTGAATTTGGAGAATACGCAAGTTAGGGATGAAGCTTTATACCCTTTGTCAAGCTTCTTAGAGCTGAGATATTTATCAATTAAAAATGCTTCACTTTCAGACGTTTCATTTTGCCATTTATCATCTATTCCTAAATTGACAAATCTTAGTATTTGTGATTCGTTATTGACAAATAATGGGCTTGATGAGTTTAAGGCTCCTGAAACTCTGAAACTGCTGGACCTCGGAGGTTGTTGGCTCTTAACTAAAGACACTATCTTGTCGTTCGGTAGACGTCATCCACAAGTTGAAGTCAGAAATGAACTTTGTACTTTATATGCTTCTAATCAAAATGGACTTGATCATTCCTCTCCATCTCGATCAACTTCCAGGACTAAGCAAATGGCTAAGAAGAAAAATCAAGTTCTGCTATCTCCGTATCTTCTAGATCAAAGATTGAAATATAGCAGGGATGAGTTACTTGTGTTGCAGTTTACGTCCTTGCCTCTTGCATCTAGTAGTGAGAGTGGCAATTCAATATTTGAGGAAATATTGGATTGTACGAAGAAATCTCCTTCTATATAA 1731 0.4148 MADAEAQSRSLAFSSRRVSPPPPRRPPVFKHSVEKVIFREYRIVDAEWMAYLGAFRHLRYLNLADCYRVSSSALWPIAGMTTLRELDLSRCGRINDAGINHLLSVPNLEKLHISETDVTAKGVKLLASLENLSLLDLGGLPVDDESLTSLQQFICLQMGSNVLPFGLQYIDLWGSKISNKGAAVLNMLPKLTYLNLGWTSVTKLPKLSSLEYLDMSNCTVESVLEDDKSPLSKLIFTGATFLNEAGIFLYANTNLLSFLDLSYSSLRKFFFLRKMKVVEHLNLCACMMGDDSIKMLACASGNLKSLNLSRTRVSSAGLGILAGHVPNLEILSLSQTPVDDTGISFISMMPSLKDLDLSNTNIKGFLHQGRIDVDSPLSLMALKNLKLERLNLENTQVRDEALYPLSSFLELRYLSIKNASLSDVSFCHLSSIPKLTNLSICDSLLTNNGLDEFKAPETLKLLDLGGCWLLTKDTILSFGRRHPQVEVRNELCTLYASNQNGLDHSSPSRSTSRTKQMAKKKNQVLLSPYLLDQRLKYSRDELLVLQFTSLPLASSSESGNSIFEEILDCTKKSPSI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01012 576 Gene3D Ribonuclease Inhibitor 22 120 IPR032675 -
Spst3g01012 576 Gene3D Ribonuclease Inhibitor 369 492 IPR032675 -
Spst3g01012 576 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g01012 576 Gene3D Ribonuclease Inhibitor 121 234 IPR032675 -
Spst3g01012 576 MobiDBLite consensus disorder prediction 500 520 - -
Spst3g01012 576 Gene3D Ribonuclease Inhibitor 235 368 IPR032675 -
Spst3g01012 576 Pfam Leucine Rich repeat 81 99 IPR001611 GO:0005515
Spst3g01012 576 Pfam Leucine Rich repeat 106 127 IPR001611 GO:0005515
Spst3g01012 576 SMART LRR_CC_2 81 105 IPR006553 -
Spst3g01012 576 SMART LRR_CC_2 129 153 IPR006553 -
Spst3g01012 576 SMART LRR_CC_2 408 432 IPR006553 -
Spst3g01012 576 SMART LRR_CC_2 456 481 IPR006553 -
Spst3g01012 576 SMART LRR_CC_2 300 324 IPR006553 -
Spst3g01012 576 SMART LRR_CC_2 55 80 IPR006553 -
Spst3g01012 576 PANTHER - 31 220 - -
Spst3g01012 576 Coils Coil 380 400 - -
Spst3g01012 576 SUPERFAMILY RNI-like 43 451 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01012 - - gmx:100814174 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01012 3 13512975 13517457 Spst3g01012 3 13512975 13517457 ECH