Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01004 ATGACTCTAAGCCTCTACACTCCATGCTTCTCTCGCCTACTCCCCCACCCTTCTCCTTCTCTCCCCAAACTCTCCGAAACCTGCGTCAACCACACCGCCAACACCAACACTCCTTTTCCCTCTCTATTTTTCACCACTCCTTCTCTTCCCAACCATTCGCGATTCCTAAACGCCAAAGCCTCCGTCAGCGAGAGCCACAATGAAACCTCCGACGACATCGCCAACATACTCGACCAGCAGCTCCTGCTCCGAGTCGCCACGAACGCCAAAGACGCCGACGAGGCCTTGCAGATCATCGCCGACCACTCCTCCCGAAACGACGGCGTCGTTTCCACCTCCGACTGCTGCTTCATCATATCCGCCGCGCTTAACCGCAACAATTCTCAACTCGCTCTCTCCATCTTCTACGCCATGCGCGCCAGTTTTCATCCAGTTGGCGTGAGTGGTCCTTTGGCGGAGAGATGGAAGTGGTCGAGGCCCAATGCAAATGTTTATGCACTGTTGATTCAGGGTTTAGCGGCGGTGCTAAGGGTTTCTGACGCTCTTAGAGTGATTAAGTATATTTGTGAGGTTGGCGTTTCGCCTGGTGAGGAGGTCCGTTTTGGGAAGATAGTGAAATGTCCTAGTTGTCGGATCGCTGTTGGTGTGGCACAGCCACAACAAGGTATTCAGATAGTATCTTGTTCCAAGTGTCGCTACCAATACGAACTTGTTTCAGGTGACATAGTCAGTATTGAATCAGAAGAAATCAGCATGGACATATCGGCGTGGGAAAGGGGGTTAAGATACATGAAACTGAGGAGGCAAAACATCCCTTCTGCTGTTCACTCTATCGTGGTGCAGACTCCTTCTGGTATGGCTCGCACTCAAAGATTTGCAACTGAAACAGTTGATCTGCCAGCACAAGAAGGAGAAAGGGTAACTATTGCCGTGGCAGCTCCATCAAATGTATATAGAAAGGTGGGCCCATTCAAATTCAGTCCAAGAGCCCCTGATTTTTATCCTGGTGAAGCTATGTGCATAACAAACCACAAAGATGGGCGGGAGTCACTACTATTAAGAGCCCCTAGAAAAGAAGAAAATTCATCATTGCTGAAACCTTCCTTCCTTTTTCCACTTCTCGCTTTGTTGGCCACTGGGGATGCTGCCTCTGGACTTATTGACCCTGGCCTTCCCCAATTACTATCAGTTGGTGCAGTTTCAACCCTTGTTGTGGGGTCTACGCTGAACACTGTTGTTCTTCCCCAGTTTAATCAGCTTCCGCAGAAGTCAGTAGATGCAATTGCAATCAAACAACGGCTTTTATCACAATATGATGTTCTTCTGTCTCGCATCAATGACCTGAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCCGTTGGAGAGCCTGCTTATCGGACACGTAGAAGTAAAGTCAAGAGGGTGCGAGAGAGCCTGGAAAACTCCCTCAGAGGACGGATTGAACTGATTGACAGCTATGCTAGGATTTCCTCTATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCAGCTGAAACTGCTAGTAATATGGACAGCATCTCAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAAGAGAGATGGAAAATTCAAGCAGAGGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTTTGGACGAAGTTTGA 1728 0.4809 MTLSLYTPCFSRLLPHPSPSLPKLSETCVNHTANTNTPFPSLFFTTPSLPNHSRFLNAKASVSESHNETSDDIANILDQQLLLRVATNAKDADEALQIIADHSSRNDGVVSTSDCCFIISAALNRNNSQLALSIFYAMRASFHPVGVSGPLAERWKWSRPNANVYALLIQGLAAVLRVSDALRVIKYICEVGVSPGEEVRFGKIVKCPSCRIAVGVAQPQQGIQIVSCSKCRYQYELVSGDIVSIESEEISMDISAWERGLRYMKLRRQNIPSAVHSIVVQTPSGMARTQRFATETVDLPAQEGERVTIAVAAPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESLLLRAPRKEENSSLLKPSFLFPLLALLATGDAASGLIDPGLPQLLSVGAVSTLVVGSTLNTVVLPQFNQLPQKSVDAIAIKQRLLSQYDVLLSRINDLKEAAEKEIWMLARMCQLENKISAVGEPAYRTRRSKVKRVRESLENSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNMDSISEQIEQIMELENLEERWKIQAEANDEAERLLSSQPMPLDEV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01004 575 Gene3D Tetratricopeptide repeat domain 77 201 IPR011990 GO:0005515
Spst3g01004 575 Coils Coil 534 564 - -
Spst3g01004 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 574 - -
Spst3g01004 575 Coils Coil 431 451 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01004 - - gmx:100781803 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01004 3 13429434 13434355 Spst3g01004 3 13429434 13434355 ECH