Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01002 ATGGAGAATCTCATCTCGTTGGTGAACAAAATCCAGAGAGCTTGCACCGCCTTAGGCGACCACGGCGAAAACAGTGCACTCCCCACACTATGGGACTCTCTTCCCGCCATCGCCGTCGTCGGAGGCCAGAGCTCCGGCAAGTCTTCCGTCTTGGAGAGCGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGGATTGTTACGCGGCGACCGCTCGTTTTGCAGCTTCACAAGATTGACGAGGGAAGCAGAGAGTACGCAGAATTCCTACACCTCCCTAGGAAGAGGTTCACCGACTTTGTTGCTGTGAGGAAGGAGATTCAAGATGAAACGGATAGAGAAACGGGACGAACGAAACAAATTTCTACTGTTCCGATTCATCTTAGTATATACTCTCCTAATGTTGTTAATTTGACGCTCATTGATCTTCCCGGGCTTACTAAAGTAGCTGTAGAGGGTCAACCGGACAGTATTGTAAAAGACATCGAGGATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATTTCACCAGCCAATCAAGATCTGGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGACCCTTCAGGGGATAGAACCATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGATATATTAGAAGGAAGAGCATATAGGTTAAAGTTTCCCTGGATTGGTGTTGTGAATAGATCTCAACAAGACATAAACAAAAATGTTGACATGATTGCTGCGAGACGTAGAGAACGTGATTACTTCAATAGTACCCCTGAATATAAACACCTTGCACACAGAATGGGTTCCGAGCATCTGGCAAAAATGCTCTCAAAGCACTTGGAGACAGTAATCAAGTCCAAAATTCCTGGCATTCAATCTCTTATTAACAAAACAATAGCTGAACTTGAAGCTGAACTAACTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGGCAAGCTGTACTCAATCATGGAAATATGCCGGTCATTTGATCAAATATTTAAAGACCATCTTGATGGCGTGTATGTGCTTCATTTTCGTAGTCTACTGGGAATTTATTTGCTTCAAAATTATCTCCATGCTGCATTCATTTTTGGTTTCAAACTAACTTTAGTAATTTGCCCAATCTTCTACAGGCGGCCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCAATGGAAAATATAAGGAAGCTTATTACCGAAGCTGATGGGTATCAGCCTCATCTAATTGCTCCAGAACAAGGATACCGCCGTCTCATTGAATCTTCTTTAATAACTATTAGGGGCCCTGCTGAGGCAGCTGTTGATGCGGTTCATTCCCTGTTGAAGGACCTGGTTCACAAAGCTATCAGTGAGACTTTGGACTTGAAGCAGTATCCCGGCCTCCGGGTTGAGGTTGGGGCTGCAGCTGTTGATTCACTAGAAAGAATGAGGGATGAAAGCAAAAGAGCAACACTGCAGCTAGTGGATATGGAATGTGGCTACCTGACTGTTGATTTTTTTCGGAAGCTTCCTCAAGACGTTGATAAGGGTGGCAATCCCACACATTCAATTTTTGATAGATATAATGATTCATATCTAAGGCGAATTGGAACAACGATTTTGTCCTATGTCAATATGGTCTGTGCTACACTGCGGCATTCAATTCCCAAGTCCATTGTCTATTGCCAAGTGCGGGAGGCAAAACGAAGTTTACTCGATCACTTTTTCACAGACCTAGGCAAAATGGAGACAAAGCGTCTGTCCTCCTTACTGAATGAGGATCCTGCAATTATGGAACGACGTAGTGCTCTTGCAAAGAGACTAGAGTTGTACCGGAGTGCACAAGCTGAAATAGATGCAGTTGCTTGGTCCAAGTAG 1947 0.4376 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRRERDYFNSTPEYKHLAHRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYSIMEICRSFDQIFKDHLDGVYVLHFRSLLGIYLLQNYLHAAFIFGFKLTLVICPIFYRRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLKDLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTDLGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01002 648 Gene3D - 1 309 IPR027417 -
Spst3g01002 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 308 IPR027417 -
Spst3g01002 648 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Spst3g01002 648 ProSiteProfiles GED domain profile. 556 648 IPR020850 -
Spst3g01002 648 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 300 IPR030381 GO:0005525
Spst3g01002 648 Pfam Dynamin GTPase effector domain 552 644 IPR003130 GO:0003924|GO:0005525
Spst3g01002 648 FunFam dynamin-related protein 1E 1 309 - -
Spst3g01002 648 PANTHER DYNAMIN 2 644 IPR022812 -
Spst3g01002 648 Pfam Dynamin family 37 213 IPR045063 -
Spst3g01002 648 CDD DLP_1 33 300 IPR001401 GO:0003924|GO:0005525
Spst3g01002 648 Gene3D Dynamin, middle domain 331 624 - -
Spst3g01002 648 SMART GED_2 551 644 IPR003130 GO:0003924|GO:0005525
Spst3g01002 648 SMART dynamin_3 1 251 IPR001401 GO:0003924|GO:0005525
Spst3g01002 648 Pfam Dynamin central region 221 526 IPR000375 -
Spst3g01002 648 PRINTS Dynamin signature 34 52 IPR022812 -
Spst3g01002 648 PRINTS Dynamin signature 201 217 IPR022812 -
Spst3g01002 648 PRINTS Dynamin signature 59 76 IPR022812 -
Spst3g01002 648 PRINTS Dynamin signature 132 149 IPR022812 -
Spst3g01002 648 PRINTS Dynamin signature 224 243 IPR022812 -
Spst3g01002 648 PRINTS Dynamin signature 182 200 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01002 Spst-Chr3 13406821 13415841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01002 - - vum:124824212 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00229 2 1743993 1748855 Spst3g01002 3 13406821 13415841 PCT