Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00993 ATGGAGGAAGAAGAACTGGAACTGTCTTTATCAAACAATTTATCCTGTAGCCTAACTTCTATGTCTTCAGTGCATAATGATTTAAAGAAAAGTGCCAGTGGGGCAAGGGATGAACCCAGTGGCTTTGATGGAACCAAGTTATTCGATGAGTCCCATTCCAAAACTAGTCCATACAGAATTGAATCTGATATGGGTCTCCATCTTGGTTTGTCAGTGGGCTCTTTTTTATCTGTTGATAATGCAGACAAGAATGAGCTAATAGATCAAGCAACTGACGTCCCGGGCATGACTTCAGACAAATGTTTTTTGAAAGGAGATGAAATTGAAGCCAATGCTTGTAAGGACAATGTCGGAGTGGCTTGTGGAAAGAGAAAGCATGCTGATATCAGTAATGAGCAAGTTCATATAAAGGCTGAGGATGGAGATGCCACGCCTGAACTACTGGATGAAGCTGTGCAAAAGAAAATTAAAGCCACTGATAGTCAAATGAGCATTACTAATGACTCCGCCAATGCTCATCTTTCAGAAAATGCTCTGAAAGACCCTGCTTTAAAACATTCTCCAACAAAGCCAACTGTTGCATCAGATATAATGAATATAGTTATAGGGACTAATCGGAGGCTTTCCAAGGGACATACTGATACTAATGCTTGTGACAAGTCATCTGAAAACAAAGGAAATATGGCTGGGTTGAGGGTTAAAAAGATCATGAAAAGAAATTCCGAGGATAGAGAATCATCCTTGGTAGTTCAAAATCTAAGGAAGGAAATTAGAGAAGCTGTCCGTAACAAATCCTCTATAAACTTTGAGGATAACCATTTTGATCCCAAGCTTCTTGAAGCATTTAGGGCTGCTATAACAGGGCCTAAAACTGAACTTGTAAACAAGTTATCCCCTGCAGCTATAAAGGCAAAGAAGTCAATGTTGCAGAAGGGAAAAGTGCGTGAAAATTTAACAAAGAAAATTTTTGGGAGTTCCAGTGGAAGGAGAAAGCGTGCATGGGATAGGGACTGTGAAATTGAGTTTTGGAAATATCGTTGCATGAGAGCTACAAAGCCTGAAAAGATTGAAACTTTAAAATCAGTTCTTGATCTACTAAGAAAAGGTTCAGATGGTTCAGAATTAAAGCAAGCTTCTGATTGTCAAACCAAAAATCCTATTCTTTCCAGGTTATATTTAGCAGATACATCTGTTTTTCCCCGGAAAGAGGATGTCAAACCTCTCGCTGTGCTTAAAACTGTTGCTAAATCTGAAGAAACTAAACAAAACAACCCATCAGAGAAAGTACCAAATCTATCTGTTGATAACAGTACTGTTAAAGCAACCAATGTAAACAATATCTCATCAACGATCAGTTTTGTTTCATCTGAAAAAAAAGTAGACAAGAAGAGTGTACAAGGTCCAGTTGGTGATAGTTTAACTTCTGGTAAAGTACGTTTAAACAATCACTCAGAAAGGACACCAGTTTTGTCAGCTGGTGCAAAAACTAGCACAAAGGAGTTAGGCCTTAAATCTGGTTGCATGAAGAGTGATAAAAGAAAATGGGCCTTGGAGGTCCTTGCGAGGAAAACAGCTACCACCAGCGGAAACACAGCAAATGGAAATCAGGAAGAAAATGCAATTTTCAAAGGAAATTATCCTTTACTTGCCCAATTGCCAATTGATATGAGACCAGCATTAGCACCTTGTCGACACAATAAAATTCCTATATCAGTTAGGCAGACACAACTTTACCGTCTGACAGAGCGCTTATTGAGGAACACAAACCTGTCTGTGATCTGCAGAACTGGCATTACAGAATTAGCTGTTGCAGATGCAATTAATATTGAAAAAGAGGTTGCTGACAGATCAAACAGCAAGCTTGTGTATTTGAACCTTTGTTCACAAGAGCTTTTGCATCACACAAATAACACAAAGTCCGGTGTAGCCACAGATACAAGTCCACCAGCTACATCAACAATGCTTACTGATCAACAATCAGAATTAAATACTGATGATCTGTCAGCTGACCCTGCAGTTGAAACAGCCTTGAAAAATGCTGGTCTTCTGTCTGATTCCCCACCTAGCAGTTCACATGAGAACAGAGAAACATGTAATGATGACATGTCGGGGCCTGATAATATATTTGAACTGGATTCTCATCCTGATCTGGATATATATGGTGATTTTGAGTATGATTTGGAAAACGAAGATTATATTGGTGCTAGTGTAACAAATGTCTCAAATCCAAAACCGGAGCAAAATGAGTCAAAAGTGAAACTTGTTTTCTCCACCATGAGCGTGAAAAAGTCAGATATAGCTTTGGATTGTGCAGACTGTGAGGGGTCTGAAAGAAATAAAGTGCCAGGAGATGCATCTTGCTCACCAAGTTGTCACAATGATGCAGTTCTTAGGGCTAGGGCTTCTACAATTGATCCGGAGACAGACCAGCTTTCTGTTTCTTCTGAGCTCCTATCTTTTGGGAGTGCTATTGAGCCTCTTGACTCAGAATTTGAAGAACTATTATATGGCCCAGACAAAGAACCACTTATAAAAGAATTTCAGGCTGGTGAATCAAGATCATTACATGGAGATGGCAAGACAGAAACTCAAAGCGTGGCCAATGACTGCCAAAATGATGAAAAACATGTTTTGGATAATGCAGTAAAAGCTTCTTCAGAAGAACAGGGGAATGAGAATCTCACAGAAAAAGTTTCTCATACTACCATCACCAACCAATCTTCTAATATATCTGAGGCTGGTGAACATTTCGAACGGAAGGAAGAAAACTCTGATATCACTGCTAAGCAGACTGATTCGTTAAATCTTGTAACTAAAAAGGTTGAAGCTTACATCAAGGAGCACATGAGACCACTGTGCAAGAGTGGTGTAATCACGGCTGACCAATACAGGTGGGCTGTTGCAAAAACGACTGAGAAGGTTATGAAGTATCACTGCAAAGCAAAGAATGCGAATTTTCTCATAAAGGAAGGTGAGAAAGTAAAGAAACTTGCAGAGCAGTATGCTGAAGCAGCCCAACAGAACAGAAAAAATTGA 3036 0.3949 MEEEELELSLSNNLSCSLTSMSSVHNDLKKSASGARDEPSGFDGTKLFDESHSKTSPYRIESDMGLHLGLSVGSFLSVDNADKNELIDQATDVPGMTSDKCFLKGDEIEANACKDNVGVACGKRKHADISNEQVHIKAEDGDATPELLDEAVQKKIKATDSQMSITNDSANAHLSENALKDPALKHSPTKPTVASDIMNIVIGTNRRLSKGHTDTNACDKSSENKGNMAGLRVKKIMKRNSEDRESSLVVQNLRKEIREAVRNKSSINFEDNHFDPKLLEAFRAAITGPKTELVNKLSPAAIKAKKSMLQKGKVRENLTKKIFGSSSGRRKRAWDRDCEIEFWKYRCMRATKPEKIETLKSVLDLLRKGSDGSELKQASDCQTKNPILSRLYLADTSVFPRKEDVKPLAVLKTVAKSEETKQNNPSEKVPNLSVDNSTVKATNVNNISSTISFVSSEKKVDKKSVQGPVGDSLTSGKVRLNNHSERTPVLSAGAKTSTKELGLKSGCMKSDKRKWALEVLARKTATTSGNTANGNQEENAIFKGNYPLLAQLPIDMRPALAPCRHNKIPISVRQTQLYRLTERLLRNTNLSVICRTGITELAVADAINIEKEVADRSNSKLVYLNLCSQELLHHTNNTKSGVATDTSPPATSTMLTDQQSELNTDDLSADPAVETALKNAGLLSDSPPSSSHENRETCNDDMSGPDNIFELDSHPDLDIYGDFEYDLENEDYIGASVTNVSNPKPEQNESKVKLVFSTMSVKKSDIALDCADCEGSERNKVPGDASCSPSCHNDAVLRARASTIDPETDQLSVSSELLSFGSAIEPLDSEFEELLYGPDKEPLIKEFQAGESRSLHGDGKTETQSVANDCQNDEKHVLDNAVKASSEEQGNENLTEKVSHTTITNQSSNISEAGEHFERKEENSDITAKQTDSLNLVTKKVEAYIKEHMRPLCKSGVITADQYRWAVAKTTEKVMKYHCKAKNANFLIKEGEKVKKLAEQYAEAAQQNRKN 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00993 1011 Coils Coil 250 270 - -
Spst3g00993 1011 PANTHER RING FINGER PROTEIN 41, 151 110 1001 - -
Spst3g00993 1011 MobiDBLite consensus disorder prediction 30 49 - -
Spst3g00993 1011 MobiDBLite consensus disorder prediction 27 49 - -
Spst3g00993 1011 MobiDBLite consensus disorder prediction 638 665 - -
Spst3g00993 1011 MobiDBLite consensus disorder prediction 680 701 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00993 - - gmx:100808102 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00993 3 13366207 13372010 Spst3g00993 3 13366207 13372010 ECH