Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00985 ATGGCAAGCATTGCTGGTACATGTCCTTTAGGAACTTTGCTCAGAAACAATGTCTCAGAAAACAATAGGAAGATGTCGGTTGTTCATTATGAGGGGCTTAGACTGCAAATGCCTTCTTCACTTAGAACTATTCAAAGCCACTACATTTCAGCTTCTTCAGCTCCAAGATGCAGAACAATCAAGGCCATGGCTTCCCCAACAGTTGCAGCACCAAAGAGAGAAAAAGATCCAAAAAAGAGGGTAGTTATAACAGGAATGGGTCTTGTGTCAGTCTTTGGCAGTGACATCGATGCATTTTACAACAAACTTCTTGAGGGAGAAAGTGGGATAAGCCTAATAGATAGGTTTGATGCCTCAAGTTTCTCTGTCCGATTTGGAGGTCAGATACGTGATTTCTCTTCCGAAGGCTACATTGATGGCAAGAATGATCGGCGCCTTGATGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCACTCGATGAGGCCAACCTTGGACAACAAGTCCTTGACACTATGGACAAAACAAGAATAGGAGTTCTGGTGGGCACAGGAATGGGAGGTTTAACGGCTTTCTCTTCTGGTGTGGAAGCTCTTATCCAGAAGGGATATAAGAAAATTACTCCATTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCTTTGTTGGCTATAGACACAGGCCTAATGGGTCCAAATTATTCCATTTCCACTGCTTGTGCAACAGCAAATTACTGCTTTTATGCGGCTGCTAATCACATTAGAAGAGGTGAAGCGGATATAATGGTGGTTGGTGGGACTGAGGCCGCAATCATGCCTACTGGTGTTGGAGGTTTCATTGCTTGCAGGGCTTTGTCTCAGAGGAATGAAGACCCCAAGAAGGCTTCAAGACCATGGGACAAAGATCGTGATGGTTTTGTAATGGGTGAAGGCTCTGGTGTGCTGATAATGGAGAGCTTGGAGAGTGCAACAAAAAGGGGAGCCAGAATAATAGCAGAATATTTGGGAGGTGCCGTAACATGTGATGCTCATCACATGACTGATCCAAGATCTGATGGACTAGGAGTTTCATCTTGCATAACCAAGAGTTTAGAAGATGCTGGAGTTTCTCCTGAAGAGGTGAACTATGTGAATGCACATGCCACATCAACATTGGCTGGTGACCTGGCTGAGGTTAATGCAATCAAAAAGGTTTTTAAGGACACATCAGAGTTGAAAATGAATGCAACTAAGTCAATGATTGGTCATGGTCTTGGGGCTGCTGGTGGTTTGGAAGCCATAGCAACTATCAAAGCCATAACAACTGGCTGGGTGCATCCAACCATTAACCAAGATAACTTGGAGCCTAGTGTTACAATTGACACTGTCCCCAACGTTAAGAAGCAGCATGAAGTTAATGTTGGTATATCCAACTCATTTGGATTCGGGGGACACAATTCAGTAGTTGTCTTTGCCCCATTCAGGCCATAA 1476 0.4431 MASIAGTCPLGTLLRNNVSENNRKMSVVHYEGLRLQMPSSLRTIQSHYISASSAPRCRTIKAMASPTVAAPKREKDPKKRVVITGMGLVSVFGSDIDAFYNKLLEGESGISLIDRFDASSFSVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKRALDEANLGQQVLDTMDKTRIGVLVGTGMGGLTAFSSGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAIMPTGVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLIMESLESATKRGARIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAAGGLEAIATIKAITTGWVHPTINQDNLEPSVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPFRP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00985 491 SUPERFAMILY Thiolase-like 293 487 IPR016039 GO:0016746
Spst3g00985 491 CDD KAS_I_II 79 486 IPR000794 -
Spst3g00985 491 SMART Beta-ketoacyl synthase 81 491 IPR020841 -
Spst3g00985 491 FunFam 3-oxoacyl-[acyl-carrier-protein] synthase 2 53 491 - -
Spst3g00985 491 Gene3D - 44 490 IPR016039 GO:0016746
Spst3g00985 491 SUPERFAMILY Thiolase-like 79 330 IPR016039 GO:0016746
Spst3g00985 491 Pfam Beta-ketoacyl synthase, C-terminal domain 334 446 IPR014031 -
Spst3g00985 491 Pfam Beta-ketoacyl synthase, N-terminal domain 79 325 IPR014030 -
Spst3g00985 491 PANTHER POLYKETIDE SYNTHASE-RELATED 77 489 IPR000794 -
Spst3g00985 491 NCBIfam beta-ketoacyl-ACP synthase II 79 486 IPR017568 GO:0006633|GO:0016747
Spst3g00985 491 ProSitePatterns Ketosynthase family 3 (KS3) active site signature. 233 249 IPR018201 GO:0004315|GO:0006633
Spst3g00985 491 ProSiteProfiles Ketosynthase family 3 (KS3) domain profile. 78 488 IPR020841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00985 Spst-Chr3 13311670 13314982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00985 25 491 Acyl Lipid Metabolism Gene Families AT5G46290 72.188 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00985 K09458 - gmx:100798044 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00985 3 13311670 13314982 Spst3g00985 3 13311670 13314982 ECH