Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00983 ATGGCATCGTCTTCGTTCACTTCGGTTCCGCTTTCTTCTTCTTCTTCCCTCAATGTTCCTCATTCTTCTTCCAAACCCACTTCCACTTTTCTTTCTTCTCCCATTGCCGCATTCTCTCATCGCCCCAAACTTCTCTTTGCGGAATCAAGATCCCTCCTTTACCCAAAGAGAAAAGGTTCTAAGTTTTCCATCACAGCTCAAACCCTAGACTTCTCTGACTCTTTCTTCGAAGGGGGTTTCGGCTCCGAAGACGACCCCAATTCTCCCGGCGGAACCGGGTTCACGGCCGTCGAGGAAAAGGAGGAACCTCCGTGCCCACCCGGTCTCCGACAGTACGAGACAATGATGGTTTTGAGACCCGACATGACTGAGGATGAGCGACTTGCACTCACCCAGAAATACGAGGAGATTCTTGTTGCTGGAGGTGGCATGTACGTAGAGGTTTTTAACAGAGGAGTTATTCCCCTTGCATATGGCATCAAGAAGAAAAACAAAGCTGGTGAGTCCAACACTTATTTGGATGGCATTTACCTTCTGTTCACCTACTTCACCAAGCCTGAATCCGTAAGCCCTCTCGGGGAGACAATGTTAGCGGATGATAATGTTATCCGATCAATGAGTTTCAAAGTTAGGAAGAGGAAATATTAG 648 0.4769 MASSSFTSVPLSSSSSLNVPHSSSKPTSTFLSSPIAAFSHRPKLLFAESRSLLYPKRKGSKFSITAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDMTEDERLALTQKYEEILVAGGGMYVEVFNRGVIPLAYGIKKKNKAGESNTYLDGIYLLFTYFTKPESVSPLGETMLADDNVIRSMSFKVRKRKY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00983 215 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 100 215 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst3g00983 215 Hamap 30S ribosomal protein S6 [rpsF]. 109 212 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst3g00983 215 CDD bS6_chloro_cyano 109 210 - -
Spst3g00983 215 Gene3D - 108 215 IPR014717 -
Spst3g00983 215 Pfam Ribosomal protein S6 111 209 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst3g00983 215 MobiDBLite consensus disorder prediction 80 106 - -
Spst3g00983 215 SUPERFAMILY Ribosomal protein S6 109 213 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Spst3g00983 215 MobiDBLite consensus disorder prediction 1 30 - -
Spst3g00983 215 FunFam 30S ribosomal protein S6 alpha, chloroplastic 108 215 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00983 K02990 - gmx:100305490 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00983 3 13298628 13300520 Spst3g00983 3 13298628 13300520 ECH