Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00982 ATGGGGGACTCGAAACGTTGGACGGTGACCTATACAAAACACATCAAGCAGAAACGCAAGGTGTATCAAGATGGATACCTAGCGCTCCACGTTTCCTCCAGCAAGGTTGCGCTGTACGATGAGTTCGAGAAACTGTTGGAATGTCGGCTCTTGAAAAACGACGAAACTGTAACCTCTGGTGAATCATTGGTTTTTAATGGTTACCTTGTTGACATCGGCGAGCTGGAGGGAGATAAGCAACCTGTATCTGAGTTGAATGTTGATAGGAAAAATAGGAGTTTTTCAAGATTCAGGACTCCTTCTGATTCAAAAACAAACGAGAAGGAGAATGCCGGACGTTTGCGGAGCCCTCTCAGTCCGTCGCAAAAAATGATCAAAGAATTTAAGAAGAGAGAACTGCTGAAGTATGGATCACCAAAGATCAGTCAGCAAGCACAAAAATCTAGTGTTGAAGAGTGGCATGTTCTATACACCACACAAGTCACTCAAAAGGCAAAGAAGTACCATGATGGTTTTTTAAGACTTGTTCCTCGTGGATCCTGTGGGGCACAGATTATTCTGTTTGACACAAGCAAGAAACTCTTAGATAGCAGATTTCGTAAGAAAGATGATGTAATAAAACCTGGTGAATCAATTGCATTTGATTCATATTTGATTGACATTTGTGAGCATCAAGGTAGTTCACCAGATTCCAAAGTTCCAGGATACAGGTTGACCAATGTTGAGGAAATGAGGATGGACACACAGAAAAATTGTCTCCAATCTGATACCCATGTAAATGCTGGAAAAAATGAATGGCAGGTCCTATACACTACAGAATTAACTAAAAAAGCTAAGAAGTATCATGATGGCTTTTTACGCATTGAACTTTGTGGATCTTTTGGGAAGCAGGTTGTTCTGTATGATTTGAGCAAAAGACCTTTAGAACGCAGGTTCCTACAGAAAGATGAAATTATAACGGCAGGTGAGTCAGTATATTTTGATGGACATTTTGTTGAAGTAGGAGAACCTGAAGGAAGTCATCAGTCTCCTGCAAACTTAAATGGAAGTGGGAATGGTAATAAAGTTGAGAGGAGAGGATATGGACAAGATGGCTGCCACAAGGTCAGTCCATCTTTTGCTAAAGGAAAACCTCTGTGTGAACTTTGTCCGGGGAAAGGTTCTGGATTGGAGTGTCTGATTACCGAACGAGAAGAGATAAAATCAAACAAGATAACCCCATCAGTCAAGCCTTTACGTGATGTCAATCAAATACTGTCCGTTTTACAGAATCCTAACCTGAAGCCTCAAGAGAGTTATGTAACAGGAGGCCAATCGCCCAATGGGTCTCGTCAAAATATTGGGGACAGGAAATCAGCTGAGGTTGATAATTCCTGTCAAAATATTGGGGATAAGGAATCAACTGTGACTGCGAAATCCCTTGATATTACATTGTCTGGAGGTAGAGAGATTCGTAACTCTAGTTTGACTCTGCTTGAAATGGGTTTTGCAGCAGCATGTAGTGGTGATAGTTTCCAATCTACTGATCATGTCAACATGTCCCACCAGAAGGAAGCCCAGACAAATACGAATGACAAAGATTTTGGTTGCCAATCTTACCTCATTACCAATGAAGGGAAGAGTGGTGAGGAGTTCTCGTGTGAAAGAGAAACAATCCCGAGTTTTGACCTAGGATTTTAA 1680 0.4137 MGDSKRWTVTYTKHIKQKRKVYQDGYLALHVSSSKVALYDEFEKLLECRLLKNDETVTSGESLVFNGYLVDIGELEGDKQPVSELNVDRKNRSFSRFRTPSDSKTNEKENAGRLRSPLSPSQKMIKEFKKRELLKYGSPKISQQAQKSSVEEWHVLYTTQVTQKAKKYHDGFLRLVPRGSCGAQIILFDTSKKLLDSRFRKKDDVIKPGESIAFDSYLIDICEHQGSSPDSKVPGYRLTNVEEMRMDTQKNCLQSDTHVNAGKNEWQVLYTTELTKKAKKYHDGFLRIELCGSFGKQVVLYDLSKRPLERRFLQKDEIITAGESVYFDGHFVEVGEPEGSHQSPANLNGSGNGNKVERRGYGQDGCHKVSPSFAKGKPLCELCPGKGSGLECLITEREEIKSNKITPSVKPLRDVNQILSVLQNPNLKPQESYVTGGQSPNGSRQNIGDRKSAEVDNSCQNIGDKESTVTAKSLDITLSGGREIRNSSLTLLEMGFAAACSGDSFQSTDHVNMSHQKEAQTNTNDKDFGCQSYLITNEGKSGEEFSCERETIPSFDLGF 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00982 559 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 1 234 - -
Spst3g00982 559 MobiDBLite consensus disorder prediction 424 464 - -
Spst3g00982 559 MobiDBLite consensus disorder prediction 93 111 - -
Spst3g00982 559 MobiDBLite consensus disorder prediction 337 362 - -
Spst3g00982 559 MobiDBLite consensus disorder prediction 93 116 - -
Spst3g00982 559 Pfam Protein of unknown function (DUF2439) 265 341 IPR018838 -
Spst3g00982 559 Pfam Protein of unknown function (DUF2439) 150 226 IPR018838 -
Spst3g00982 559 Pfam Protein of unknown function (DUF2439) 5 80 IPR018838 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00982 - - var:108322916 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00982 3 13291531 13296830 Spst3g00982 3 13291531 13296830 ECH