Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00980 ATGGTGCACGCACACAGCATTTTGGTCGTAACCATTAATGGTTCTGGCTGCGTCATTGAACTCATATTTATCACACTCTTTTTGATATACTCCGATGGAAAAAAGAGGCTCAAGGTTTTTCTCTGGCTCTTGTTGGAACTCGTTTTAATGGCAGCTCTCATCTTCGTCACGTTAACTCAAGTCCACACCCTCAAAAAACGCTCTGAAATTGTGGGAACCATTTGCATTCTCTGCAATATTATGATGTATGCTTCACCCTTATCTATCATGAAACTGGTAATCAAGACTAAGAGTGTTGAGTACATGCCCTTTTACATCTCTCTTGCCTCTTTTGGGAATGGCGTGGCTTGGACTACTTATGCTCTCATCCGTTTCGACCCATTCATCACTATACCAAATGGACTTGGGACTTTACTTTCGGTGGCTCAACTGATTCTGTATGCCACCTATTACAAGTCCACTCAGAGACAAATAACAGCAAGAAATGCTAACAAAGACGTGAATCTGACCCAGGTTATGGTGGCCAATATTGGTAGCCAACAATTCAAGCCAAATAATTGA 561 0.4171 MVHAHSILVVTINGSGCVIELIFITLFLIYSDGKKRLKVFLWLLLELVLMAALIFVTLTQVHTLKKRSEIVGTICILCNIMMYASPLSIMKLVIKTKSVEYMPFYISLASFGNGVAWTTYALIRFDPFITIPNGLGTLLSVAQLILYATYYKSTQRQITARNANKDVNLTQVMVANIGSQQFKPNN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00980 186 FunFam Bidirectional sugar transporter SWEET 67 160 - -
Spst3g00980 186 Gene3D - 62 156 - -
Spst3g00980 186 PANTHER RAG1-ACTIVATING PROTEIN 1 5 159 IPR047664 -
Spst3g00980 186 Pfam Sugar efflux transporter for intercellular exchange 70 154 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00980 Spst-Chr3 13283943 13284970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00980 2 186 Miscellaneous Gene Families AT4G10850 48.958 1.45e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00980 K15382 - gmx:100802303 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00980 3 13283943 13284970 Spst3g00980 3 13283943 13284970 ECH