Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00973 ATGGCTCGCTCGTTTTCACGCGGGTCTTTGCTTCCTCTCGCCATTGTTTCTTTAGGATGTCTGTTTGCTATTTCGATTGCGAAAGAGGAGGCGACGAAGTTGGGGACGGTTATTGGAATAGACCTTGGAACGACCTATTCCTGTGTAGGTGTTTACAAGAATGGCCACGTTGAAATCATAGCCAATGACCAAGGTAACCGTATCACCCCTTCATGGGTTGCTTTCACCGACAGTGAGAGACTCATTGGGGAGGCTGCCAAAAATCAGGCAGCTGTAAACCCCGAAAGGACAATCTTCGATGTCAAGAGACTTATTGGAAGAAAGTTTCAAGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTATAAAATTGTCAACAAGGATGGAAAACCTTACATAGAGGTGAAAATTAAGGATGGTGAGAACAAGGTGTTCAGCCCCGAGGAAATCAGCGCCATGGTTTTGATTAAAATGAAGGAAACCGCGGAAGCATTCCTTGGAAAGAAAATTCATGATGCTGTGGTCACTGTCCCAGCTTACTTCAATGATGCTCAAAGGCAGGCTACCAAGGACGCTGGTGTCATTGCTGGTCTCAATGTTGCTAGAATTATTAATGAACCCACTGCAGCTGCCATTGCCTATGGATTAGACAAAAAGGGTGGCGAGAAGAACATTCTAGTCTTTGATCTTGGGGGTGGGACATTTGATGTCAGTATCTTGACAATTGATAATGGTGTTTTTGAGGTTCTTGCTACAAATGGAGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAATAATGGAGTATTTCATTAAATTGATCAAGAAGAAGCACGGAAAGGACATTAGCAAGGACAACAGAGCACTCGGCAAGCTGAGGAGAGAGGCCGAGCGTGCAAAGAGATCTCTCAGTAGCCAGCATCAGGTCCGCGTTGAAATTGAATCACTTTTTGATGGTGTTGATTTCTCTGAGCCACTCACCAGAGCACGGTTTGAGGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCAGTGAAGAAGGCTATGGAAGATGCTGGTTTACAGAAGAGTCAGATTGATGAGATTGTTCTCGTCGGTGGAAGCACAAGGATTCCAAAGGTTCAACAGCTTTTGAAGGACTACTTCGATGGAAAAGAGCCAAACAAGGGTGTCAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGGAAGCATTTTGAGCGGAGAGGGCGGTGAAGAAACCAAAGATATCCTTCTCCTGGATGTGGCTCCCCTCACCCTTGGAATTGAAACTGTTGGTGGAGTGATGACTAAGTTGATTCCCAGAAACACCGTTATTCCAACCAAGAAATCTCAGGTGTTTACCACCTACCAGGACCAGCAGAGTACTGTGTCCATTCAGGTTTTCGAAGGTGAGAGGAGTCTCACAAAGGACTGCCGTCTGCTTGGGAAATTTGATCTGTCAGGAATTCCTCCAGCTCCAAGGGGTACCCCTCAAATTGAAGTGACCTTTGAAGTTGACGCAAATGGGATCCTGAATGTGAAGGCAGAAGACAAGGGCACTGGGAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGTCTGAGTCAGGAGGAAATCGAGAGAATGGTGCGTGAGGCGGAGGAGTTTGCGGAGGAAGACAAAAAGGTGAAGGAGAGGATTGATGCTCGGAACAGTCTTGAAACCTACGTCTACAACATGAAAAACCAGGTCAGTGACAAGGACAAGCTGGCTGGCAAGTTGGAGGGAGATGAAAAGGATAAAATAGAGAGCGCAGTGAAGGAAGCATTGGAATGGCTTGATGACAATCAGAGTGTGGAGAAAGAAGAATATGAAGAGAAGCTCAAGGAGGTGGAAGCCGTTTGCAACCCAATCATCAGCGCTGTGTATCAGAGAACAGGAGGTGCCCCAGGTGGTGCATCAGGCGAGGACGACGATGATTCTCACGACGAGCTCTAA 1998 0.4625 MARSFSRGSLLPLAIVSLGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGENKVFSPEEISAMVLIKMKETAEAFLGKKIHDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRSLSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQVSDKDKLAGKLEGDEKDKIESAVKEALEWLDDNQSVEKEEYEEKLKEVEAVCNPIISAVYQRTGGAPGGASGEDDDDSHDEL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00973 665 MobiDBLite consensus disorder prediction 644 665 - -
Spst3g00973 665 FunFam Luminal-binding protein 5 570 645 - -
Spst3g00973 665 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Spst3g00973 665 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 574 IPR029047 -
Spst3g00973 665 Gene3D - 571 645 IPR029048 -
Spst3g00973 665 FunFam Heat shock protein 70 38 225 - -
Spst3g00973 665 Gene3D Actin; Chain A, domain 4 260 343 - -
Spst3g00973 665 PANTHER HEAT SHOCK PROTEIN 70KDA 37 608 IPR013126 GO:0005524|GO:0140662
Spst3g00973 665 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Spst3g00973 665 Coils Coil 614 634 - -
Spst3g00973 665 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Spst3g00973 665 FunFam Endoplasmic reticulum chaperone BiP 260 343 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 234 244 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 36 49 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 421 440 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 86 94 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 362 378 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 174 194 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 394 414 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 502 518 - -
Spst3g00973 665 PRINTS 70kDa heat shock protein signature 64 76 - -
Spst3g00973 665 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Spst3g00973 665 CDD HSPA5-like_NBD 35 409 IPR042050 -
Spst3g00973 665 Gene3D - 220 394 - -
Spst3g00973 665 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Spst3g00973 665 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Spst3g00973 665 Coils Coil 284 304 - -
Spst3g00973 665 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 570 IPR029047 -
Spst3g00973 665 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Spst3g00973 665 Gene3D - 38 409 - -
Spst3g00973 665 FunFam Chaperone protein HscA homolog 226 274 - -
Spst3g00973 665 Coils Coil 546 566 - -
Spst3g00973 665 FunFam Heat shock 70 kDa 416 570 - -
Spst3g00973 665 FunFam Heat shock protein ssb1 99 154 - -
Spst3g00973 665 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 651 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00973 Spst-Chr3 13204132 13207574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00973 1 646 Miscellaneous Gene Families AT5G28540 91.176 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00973 K09490 - gmx:100803843 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00973 3 13204132 13207574 Spst3g00973 3 13204132 13207574 ECH