Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00822 ATGGCCTCTTATGTATCTCCGTCTTGGTTCATGCTCTCATCCACCGACGCCAAACGCAATCCCTTCTTCTTTGTCCCTAGCTGCTTTAAATTCAATGCTCCCATCGCTTCACAAATCCAATGGCATTCAGATTCATATTCCCGCAGAAACCTCCGTCCAACCCCCGAAATCAAACGTCATTGGGTCGAAGCTTCTGATCAATCTTTGGCGTCTCCGGAAAGATTCAGCGTGGCCTCTTACAACATACTGGGGGATAGAAATGCTTGTCAACACTCGGATTTATACGTAAACGTTCCTTCTCGTTACATCAAATGGGATCGTCGAAAGAAGGTTATTTCTGATGAGCTTCTTGGATGGGACCCTGATATTATCTGCTTACAAGAGGTGGACAAGTATTTGGAACTCTCAGACGTTATGGTTAAAGCAGGATATGCTGGATCTTATCAGAGACGCACTGGGGATTCAGTTGACGGTTGTGCCATGTTTTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAACATTCAATTTAAGGACATTGGTCTTCGTGATAATGTTGCCCAACTTTCAGTTTTTGAGATGTGTGAATCTTACTCAAGAAGACTGTTAGTTGGTAACATCCATGTACTTTACAACCCAAACAGGGGAGAAGTTAAATTAGGACAAATTCGTTTTCTCTCATCAAGAGCACAGTACCTCTCAAAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTCAATAGTACTCCTCAGAGTGGAATATACAAGTTTTTGTCATCGTCTGAGATTAATGTAAAGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGTTGTCGTCCTGCACAAGTTTTAGGCGAGAGTAAAGAAACAGTTGGTCCAGTTGTCACCCTAGATGGCTTGATAAAATACTGGACAGATGAAGAGATAAAAATAGCAACTGGAGATTCTCAGCGTCATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTATGCCACAGTTAATGGTTCAACAAGTACACGGGGATTTAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCACTGTAGATTACTTATGGTACACGGACGGTATTGTACCTACAAGAGTCCTTGATACGGTTTCAATAACTGATCTCCTAAGGGCCGGTAGCCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAATTTTCATTCTCAGTTACCAACAATGAACCTACAGACATAGTGGCGGCAGCAGCAGCAGCAGCACCAGCAGCTATAGTAGATATTGAAGAGCCTAACAATCAGCAGTCATGA 1335 0.43 MASYVSPSWFMLSSTDAKRNPFFFVPSCFKFNAPIASQIQWHSDSYSRRNLRPTPEIKRHWVEASDQSLASPERFSVASYNILGDRNACQHSDLYVNVPSRYIKWDRRKKVISDELLGWDPDIICLQEVDKYLELSDVMVKAGYAGSYQRRTGDSVDGCAMFWKTDKFRLLEGENIQFKDIGLRDNVAQLSVFEMCESYSRRLLVGNIHVLYNPNRGEVKLGQIRFLSSRAQYLSKKWGNTPVVLAGDFNSTPQSGIYKFLSSSEINVKLYDKKELSGQKRCRPAQVLGESKETVGPVVTLDGLIKYWTDEEIKIATGDSQRHLAVHPLKLNSSYATVNGSTSTRGFNGEPLATSYHSKFLGTVDYLWYTDGIVPTRVLDTVSITDLLRAGSLPCKKVGSDHLALVSEFSFSVTNNEPTDIVAAAAAAAPAAIVDIEEPNNQQS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00822 444 SUPERFAMILY DNase I-like 61 414 IPR036691 -
Spst3g00822 444 Pfam Endonuclease/Exonuclease/phosphatase family 78 402 IPR005135 GO:0003824
Spst3g00822 444 Gene3D Endonuclease/exonuclease/phosphatase 47 427 IPR036691 -
Spst3g00822 444 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 50 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00822 Spst-Chr3 11688869 11694212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00822 76 263 EF-hand Containing Proteins AT5G54130 28.922 9.67e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00822 - - gmx:100779393 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00822 3 11688869 11694212 Spst3g00822 3 11688869 11694212 ECH