Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00816 ATGGCGCCGAAATTGTCGAATTCGGGGTCGTTTCGTCACGGTTTGGCGGAGAAGAAGGAGAGGCTTCTCTCGGAGAAGGGTAGTAATAATATTTCTCAGATGGGGATTGGAATGGGGAGGATGCAAGAAGAAGAACACTGGTGGGCCGTGCAGTGGTGGAACAAGGTTAAACAAGGGGCGGAGAAGGCATGGGAAATGGGTTGCTCTGATCCCAGAAAGGCTATTTTCTCTGTAAAAATGGGTCTTGCTCTGACCCTTATTTCGTTTTTGATTTTCCTCAAAGAACCCTTCAAGGATATGAGTCGCTACACCGTCTGGGCCATTCTAACTGTCGTCGTAGTCTTTGAATTCAGCATAGGGGCAACTCTGAGCAAAGGTTTTAACCGAGGATTGGGAACTTTGTCAGCTGGAGGACTTGCTCTGGGGATGGCAGAGTTATCTGAACTGGCTGGAGATTGGGAGGAGCTTATAATTATTATAAGCATCTTCACTGTAGGATTTTGTGCCACCTATGCAAAACTATACCCTACTTTGAAGGCTTACGAATATGGGTTCCGTGTGTTCTTGATCACATATTGTTTCATTACTGTATCTGGGTATCGAACAGGGGAATTTTTAGATACAGCTGTAAAAAGATTTTTACTTATTGCACTTGGTGCTGCTGTATCTTTGGGAGTAAATATCTGTATATACCCTATCTGGGCTGGTGAGGACCTGCATAATCTTGTCACGAAAAATTTCATGGGTGTTGCAACATCTTTGGAAGGTGTTGTGAATCACTACCTTCATTGTGTTGAATATAAAAAGGTGCCATCTAAAATTCTTACTTACCAAGCTGCTGATGACCCAGTTTACAATGGCTATAGATCGGTTGTTGAATCTACAAGTAAAGAAGATTCATTGATGGGATTTGCTGTCTGGGAACCACCACATGGTCGTTACAAAATGCTCAGATATCCATGGAAGAATTATGTGAAACTAAGCGGGGCTCTAAGACATTGTGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCTGAGAAGAGACTAGTTTTCCGTAGTGAAATTCAAAGGGTAGGTGGTGAAGGGGCAAGAGTGTTGCGTGAACTTGGAAACAAGGTTAAAAAAATGGAGAAACTAGGTCGAGGAGACTTGCTGTTTGAGGTGCACGAAGCAGCAGAGGAATTGCAACAGAAGATTGATAAAAAATCATACCTTCTTGTGAATTCAGAGACCTGGGAAATTGGAAACCGTCCAAGAGAGGATGAGGAGAGTGATCGTCAAGAACAGGGTCTCTTCAACATGGATGAAGAAAGAAAATTTCTTGAGTACAAGTCTCTTAGTGAAGCAGTACTTGATCTGAGAACAGTTGAAGTTCCACATTCTTGGGAAGGAAAAGTAACTTTAGGCGATAGCCCTGCTATGTCTGCAACCGATGCCTCTCCAAACATGTTCAGGAAAGGTATAACTTGGCCCGATCATATTTACCACAAATCAAATCCAGTAGCCAAAGAAGGTCAAGAATCAAAAACCTACGAAAGTGCTAGCTCACTGTCACTAACAACATTTACGTCGCTTCTGATTGAATTTGTGGCAAGGCTTCAAAATCTGGTTGATTCATTCGAGGAGTTGGGTGAAATAGCAAATTTTGTTGACCCAGTTGAGCAACAAGCACAAGTAGCATCACCTGGGTTTTGGACCAGGTTGTGTAACCGCTTAAAATTCAAGGACTGA 1755 0.4285 MAPKLSNSGSFRHGLAEKKERLLSEKGSNNISQMGIGMGRMQEEEHWWAVQWWNKVKQGAEKAWEMGCSDPRKAIFSVKMGLALTLISFLIFLKEPFKDMSRYTVWAILTVVVVFEFSIGATLSKGFNRGLGTLSAGGLALGMAELSELAGDWEELIIIISIFTVGFCATYAKLYPTLKAYEYGFRVFLITYCFITVSGYRTGEFLDTAVKRFLLIALGAAVSLGVNICIYPIWAGEDLHNLVTKNFMGVATSLEGVVNHYLHCVEYKKVPSKILTYQAADDPVYNGYRSVVESTSKEDSLMGFAVWEPPHGRYKMLRYPWKNYVKLSGALRHCAFMVMAMHGCILSEIQAPAEKRLVFRSEIQRVGGEGARVLRELGNKVKKMEKLGRGDLLFEVHEAAEELQQKIDKKSYLLVNSETWEIGNRPREDEESDRQEQGLFNMDEERKFLEYKSLSEAVLDLRTVEVPHSWEGKVTLGDSPAMSATDASPNMFRKGITWPDHIYHKSNPVAKEGQESKTYESASSLSLTTFTSLLIEFVARLQNLVDSFEELGEIANFVDPVEQQAQVASPGFWTRLCNRLKFKD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00816 584 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 50 563 - -
Spst3g00816 584 Pfam Aluminium activated malate transporter 64 552 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00816 Spst-Chr3 11606694 11610891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00816 6 560 Miscellaneous Gene Families AT3G18440 60.959 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00816 K25841 - gmx:100777792 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02727 4 67149780 67156520 Spst3g00816 3 11606694 11610891 ECH
Spst3g00816 3 11606694 11610891 Spst3g00816 3 11606694 11610891 ECH