Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00801 ATGCGATTGAATATCACAAATGCTTTACTATCATCACTCCCACACGCTTCGCCCACTTCCAAATTCAAATTCACGTTCCCACCCGGAAATTGCATTCGCGTTCGCGCTCTCAACGCCTTCTCCTCTCTCCTAACTACTCGCCACGACGACCACGACGATTTGTTCGCCCCTCTTCCCACTCCCCGTCACGTCGACAAAGCCACCAACGCCATCGAGAGAATCGCCCTGCGCTTGCGCAACTTAGAGTTAGCCTCCGCCGACCACGCTGCTGACGACGATTTCCTGCGACGCGAATGGCTTCGTCCCGACGAGGCGCTTTTGCCGTGGAACAAGCAAGAAGAAAAAGAGGAGGAGGAGCACGAGGAACAGGAGAAGGGGAAACTAAAGAAAAAGAGCGTTAATGCAGCGACACTGGCGGAGCAATCGCTGGAGGAGGAGGAGCTGCGGCGGTTACGAACGCTGGGAATAAGTCTTAAAGAGAAGATCACTATCCCCAAAGCTGGCCTCACGCGAGCCGTGCTCGACAAAATTCACCGTCAATGGAGCAACTGCGAGTTGGTGAGGCTCAAGTTTCACGAGCATCTTGCCCAGAACATGAAGTTGGCTCATCAAATTGTTGAGGGTAGAACTAGAGGTTTAGTTATATGGAAGTCGGGAAGATATATGTGGGTGTACCGTGGTAGGAATTACCAAGGGCCGATGCAACCAAATGAAAAGGAAGGAGATGATCAAATTTATGTGCCCGCAAATGGTGATCCAGTTTTCTGGAAGGAGAACATGACACCAGAGGAAGTGGAGTTTAACAGGATGCTTGATGGCTTTGGTACTCGTTTCGTTGAATGGTGGGGCACTGGAATACTTCCAATTGATGCTGATTTGCTTCCCCCTACAGTTCCTGGTTACAAGACGCCTCTTAGGCTTCTTCCTGCTGGAATGCGTCCACGACTGACCAATGATGAACTCACCAATATGCGGAAACTTGCCAAATCACTTCCTTGTCACTTTGCCTTGGGGAGGAATAGAAATCTTCAAGGTCTGGCATCTGCTATTCTCAGGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGGAGTCAAGCGTGGTCTTGTGAATACAAATAATGAACTGATGGCTCAGGAGCTGAAGAAATTAACAGGAGGTACCTTACTTCTACGGAACAAATATTACATTGTAATATTTCGTGGGAAGGACTTTGTTCCCACCAGTGTAGCTGCTGTTATTGCTGAAAGACAGGAAATGACAAAACACATGCAGGATGTTGAGGAGAAGGTCCGGTGCAAAGTTCATGACGTAGCTCCATCAAGGGAAGATGAATCAACAGCACAAGCAGGATCATTGGCGGAGTTCTATGAGGCTCAGGAATGCTGGGGAAGGGATATATCTACTGAAGAAAAGGATAGGATGATGCAAGATGCGGCCAAATCTAAGCATGCTAAGCTTGTAAAAAAAATTGATCGTAAACTAGCTGTTGTAAGTATCTACTTGTTTTGTGAAGGTTATATGCTTGGAAAAGCCCAGGCCAAAAGGCTTAGAGCAGAAAAGCTGTTGGCAAAAATAGAAGCATCTTTGGTTCCAGTTGGTCCTGATTATGACAAGGAAACAGTCACAGATGAAGAATGTGTTATGTTCCGTTCAGTTGGTTTAAGAATGAAGGCATACTTGCCACTTGGTATACGCGGTGTTTTTGATGGTGTCATTGAGAATATGCATTTACATTGGAAACATCGAGAACTTGTTAAGTTAATAACAAAACAAAAGACTCTTGCTTTTGTTGAAGACACAGCTAGGTTACTGGAATATGAGAGTGGTGGAATACTAGTAGCAATAGATAAAGTTCCTAAAGGATTTTCTCTTATTTACTATCGTGGAAAGAATTATCGGCGACCTATGACTCTAAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTGCAGCGTTCAATAGCCATGCAACGGCATGAGGCTCTGAGTCAGCATGTAACTGAATTGGGGGAAAAAATAGAAAAAATGAAAAAAGAACTTGTTTTCTCGCAAGATTTGGGGCCTGAAGATAGGTGGAACATTGAGGACGACAACCAAATAGACCATATATCAGAATTCGCCCCAGCGGTTGTTCTGCAGAATGAGGATGAATACTCTGACAGAGATGACAATGGTGGGGATTTCAATAGCGAGGAATACAGTGATTGCAATGATGAGGATTCTGAATTTTAG 2232 0.4516 MRLNITNALLSSLPHASPTSKFKFTFPPGNCIRVRALNAFSSLLTTRHDDHDDLFAPLPTPRHVDKATNAIERIALRLRNLELASADHAADDDFLRREWLRPDEALLPWNKQEEKEEEEHEEQEKGKLKKKSVNAATLAEQSLEEEELRRLRTLGISLKEKITIPKAGLTRAVLDKIHRQWSNCELVRLKFHEHLAQNMKLAHQIVEGRTRGLVIWKSGRYMWVYRGRNYQGPMQPNEKEGDDQIYVPANGDPVFWKENMTPEEVEFNRMLDGFGTRFVEWWGTGILPIDADLLPPTVPGYKTPLRLLPAGMRPRLTNDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGLVNTNNELMAQELKKLTGGTLLLRNKYYIVIFRGKDFVPTSVAAVIAERQEMTKHMQDVEEKVRCKVHDVAPSREDESTAQAGSLAEFYEAQECWGRDISTEEKDRMMQDAAKSKHAKLVKKIDRKLAVVSIYLFCEGYMLGKAQAKRLRAEKLLAKIEASLVPVGPDYDKETVTDEECVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRRPMTLRPRNLLTKAKALQRSIAMQRHEALSQHVTELGEKIEKMKKELVFSQDLGPEDRWNIEDDNQIDHISEFAPAVVLQNEDEYSDRDDNGGDFNSEEYSDCNDEDSEF 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00801 743 MobiDBLite consensus disorder prediction 110 134 - -
Spst3g00801 743 MobiDBLite consensus disorder prediction 714 743 - -
Spst3g00801 743 ProSiteProfiles CRM domain profile. 314 411 IPR001890 GO:0003723
Spst3g00801 743 ProSiteProfiles CRM domain profile. 141 237 IPR001890 GO:0003723
Spst3g00801 743 Gene3D - 142 242 IPR035920 -
Spst3g00801 743 Gene3D - 540 640 IPR035920 -
Spst3g00801 743 Gene3D - 315 409 IPR035920 -
Spst3g00801 743 MobiDBLite consensus disorder prediction 110 131 - -
Spst3g00801 743 Coils Coil 110 131 - -
Spst3g00801 743 Coils Coil 64 84 - -
Spst3g00801 743 SMART CRS1_YhbY_2 541 628 IPR001890 GO:0003723
Spst3g00801 743 SMART CRS1_YhbY_2 143 226 IPR001890 GO:0003723
Spst3g00801 743 SMART CRS1_YhbY_2 316 400 IPR001890 GO:0003723
Spst3g00801 743 SUPERFAMILY YhbY-like 540 638 IPR035920 -
Spst3g00801 743 FunFam CRM-domain containing factor CFM3B, chloroplastic 540 642 - -
Spst3g00801 743 FunFam CRS2-associated factor 1, chloroplastic 142 237 - -
Spst3g00801 743 SUPERFAMILY YhbY-like 142 235 IPR035920 -
Spst3g00801 743 SUPERFAMILY YhbY-like 316 407 IPR035920 -
Spst3g00801 743 Coils Coil 409 429 - -
Spst3g00801 743 ProSiteProfiles CRM domain profile. 539 639 IPR001890 GO:0003723
Spst3g00801 743 Pfam CRS1 / YhbY (CRM) domain 542 628 IPR001890 GO:0003723
Spst3g00801 743 Pfam CRS1 / YhbY (CRM) domain 316 400 IPR001890 GO:0003723
Spst3g00801 743 Pfam CRS1 / YhbY (CRM) domain 143 226 IPR001890 GO:0003723
Spst3g00801 743 Coils Coil 659 679 - -
Spst3g00801 743 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 91 703 IPR045278 GO:0000375|GO:0003729
Spst3g00801 743 FunFam CRS2-associated factor 1, chloroplastic 315 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00801 Spst-Chr3 11497894 11503447 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00801 - - vra:106765477 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00801 3 11497894 11503447 Spst3g00801 3 11497894 11503447 ECH