Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00788 ATGGCTATGGGTCCAGAAAGATCCAAACCTCTCCACAACTTCCCTATGCCCTGTCTCAAATGGGGCAACCAGAGATTCCTCAGGTGCGTTAAAGTTGCCGCCACCGATGATCCTAGCGACATCTCCGCCGTTCGCCGGAAGCTCATGCTCGATCTTAGAGTCGCCGCCGACAACCTCAAAGTTTCCATGTTCCAAGAACCCAATTCCAAAAACTGGAATTTGCGAACCAGAAGAGCCGCCTGCAAGGCACCGCATCACACTAACCGACTCAATTCACTCACTCAAGAGATGATGAAGAAGAAGAAGAAGATGAAGATTGAAGAAAAAACCAAGTTTTCCATTTCACTCTCGAAGGAGGAGGTGGAACACGATTTCTGGGCCTTGCTCGGAACCAGACCTCCCAGGAGGCCGAAGAAGAGGCCCAAAACTGTCCAGAAGAATTTGGATACACTTTTTCCTGGTTTGTGGCTCTCCGAGGTTACTGCAGAATCTTACGAAGTGCCTGAAGTTCCTGAATGA 519 0.4933 MAMGPERSKPLHNFPMPCLKWGNQRFLRCVKVAATDDPSDISAVRRKLMLDLRVAADNLKVSMFQEPNSKNWNLRTRRAACKAPHHTNRLNSLTQEMMKKKKKMKIEEKTKFSISLSKEEVEHDFWALLGTRPPRRPKKRPKTVQKNLDTLFPGLWLSEVTAESYEVPEVPE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00788 172 Coils Coil 90 110 - -
Spst3g00788 172 Pfam Protein of unknown function (DUF1639) 116 165 IPR012438 -
Spst3g00788 172 PANTHER PUTATIVE (DUF1639)-RELATED 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00788 Spst-Chr3 11427920 11428535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00788 - - pvu:PHAVU_002G317700g 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00788 3 11427920 11428535 Spst3g00788 3 11427920 11428535 ECH