Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00786 ATGGCGGGTTCTTCGATCATGGAGAACCTCTTCCAGCGATCGCTGGAGGATCTCATCAAAGCCATGCGCCTCCAACTCATCGGCGAATCTACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGATCAGCAAACCAAATCCACCGCGCTTCACAAGCTCTCCTATCTCTCTTCCGTGCATGGTGTCGACATGTCCTGGGCGTCCTTTCACGTCGTCGAGGTCATGTCCTCCTCCAAGTTTGCTCACAAGAGGATTGGTTACCACGCGGCTGCCCAATCCTTCAACGACGATACGCCGGTGCTCCTCCTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAATGAGTTCGAGGTAAGCCTCGCTCTCGATTTGTTGTCGCGAATCGCCACTCTCGACCTCGCTCGCGATTTGACGACCGAGGTTTTCAAATTGCTCGCCACTGCTAGGGTTTTCGTTAGGAAGAAGGCTATCGCGGTCGTTTTGAGGGTTTTCGATAAGTACCCCGACGCGGTTAGGGTATGCTTCAAGCGCTTGGTTGAGAATCTCGAGAGTTCCGATCCTCAGGTTGTGACCGCCGTAATTGGAGTTTTCTGCGAGCTGGCTGCCAAGGATCCTAGGTCGTATCTTCCCTTGGCGCCAGAGTTTTATAGGATTTTGATTGATTCTAAGAACAATTGGGTTTTGATTAAGGTGCTCAAGGTGTTCGCTAAGTTGGCTCCCCTGGAGCATAGATTAGGGAAAAGGATTGTTGAGCCGGTTTGTGATCATATGAGGAGGTCTGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTTACTGGCCTGAGTGATTATGACTCGGCTGTTCAGCTCGCGGTGGAGAAGGTTAGGGAGTTGGTGGTTGACCAGGATCCCAATCTTAGGTATCTTGGGCTGCAGGCACTTTCGGTTGCTGCACCCAAGCACTTGTGGGCAGTCTTGGAGAATAAAGAGGCGGTGGTAAAGTCGTTGAGTGATGATGATTTGAATATTAAGATTGAGTCTCTGCGATTGTTGATGGCCATGGTATCTGAGAGCCATGTGGCAGATATCTCCAAGGTGCTGCTTAATTATGCGTTGAAGTCTGACCCGGGATTTTGCAATGAGATATTGGATTCCATTTTGAAGACATGTTGTAATAATGTGTATGAGATTGTTGTTGACTTCGATTGGTATGTGTCTCTTCTTGGAGAAATGGCCATGATTCCTAATTGCCAAAATGGGGAAGAGATTGAAAATCAGCTTGTTGACATTGGCATGAGAGTTAAGGATGCTAGAATGGAGCTTGTTCGGGTGGGGCGTGATCTGTTGATTGACCCTGCATTACTGGGTAATGTGCACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTTGAGTTTGCAAGCAATCCCTTTGAACTCGTGGATGCACTCCTGCAGCCTCGGACCAGTCTCTTGCCACCATCCATTAGAGCAGTTTATATTAATTCTGTTCTTAAAATTTTAATTTTTTGCCTGGACTGTTACCTTTTGCAAAATGATGGTTCTGGATCTTTGTATTCTGGTAATTTAGATGGGAGACAGTCAGAGTTATTTAGTGTAAAAAATGACACTGAGGCTACTGAATTGGCAACTTGTGGAGGTTCAAATTATGAACAAGATGTTGGTTTTAACCCAAGGAATACAGCTGAACCTTCTGAAGATCTTTCTGTTGAAAATGGTATAGATAGAGCTGCCATGCATGGTAAAACATTTACATCTAACCTATTGGAAAAGAAGAATTCCATGCAGGAATCTATTGTAAGCTTATTGAATCGAATTGAATTAATTTTTGGACCGCTAATAGCAAACCAGGATGTTGAAGTGCTGGAGAGAGCACAAAACATACTTTCCCTTGTCCAGTTGATTAAAGAAGAAATAATTGATAATTCAGGCCAGAGTGTGGACATTATGGAAAAAAAAGATACTCGAGTTTCAGCTATTATCAATTCAATGCGTGATGCTTTTACTACTGAACTTGGTCCAGTCTCAATAAGTGCACAGGGAAGAGTTGCTGTGCCGGATGGACTAGTTCTGAAAGACAATCTTGATGACTTACAAGAAATATGTGGTGATACTGAACTACCTTCAAGTTCGTTTGGCACAGGAGGCCCTCACCTTACCACTAATTCGGATGCTTCTTCGTCTAATCTTCTGAACAATGAAGAGTCAGGGCCATTGAATGAATGCACATCCTTAATTGAACACCGTAAGCGGCATGGGTTATATTATCTTCCTACAGAGAAGAGTGAGATTGTACCAGATGAGTATCCTCGTGCAAATGATCCAAAGTCAAACAGTAATGTAAATGATGAAGCCGCCGAACTGGTCAAGCTGACAGAGCAATCACTTCTTCTGAAGAAAAGGACTAACCAAACGAAGCCCAGGCCAGTAGTGGTGAAATTGGATGATGGAGATATCGCACCAATTTCAGTCAAAAGGCCAGAGCCAAGGGATGATTCTCTTTCTGGTGCCATAAAAGATGTTCTTCTGGGAAATGAAACTGGACCAAGTGTGTCTCGAAGTTATCCTTCTGATAAGTCATCAAGGAAGCAGACAGAGAAAAAGAAACTAAGCACGAATGGTCGATCTGAAATGAAGGAAAATGAAGTTGATGCAGAAAAGCCTGACCCTGAAAGTCCAAATTCGAGCAGCAAAAATCATGGTCATAGTAAACACAGAAGACACAGAGTAAAAGAAAAGTCTGTTGAGGGTGAAGAGCATGATCAGAGGGGAAAGAAAAAGAGTGGCCACCACCATGGTAGGAGAAAAACTCATCAAAGAGCAAAGTCGCCCTTAAATGTGGTTTCCCAAACCCCTGTCATTCCAGATTTTCTTTTGTAG 2925 0.4492 MAGSSIMENLFQRSLEDLIKAMRLQLIGESTFISKATEEIRREIKSTDQQTKSTALHKLSYLSSVHGVDMSWASFHVVEVMSSSKFAHKRIGYHAAAQSFNDDTPVLLLITNQLRKDLSSTNEFEVSLALDLLSRIATLDLARDLTTEVFKLLATARVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPQVVTAVIGVFCELAAKDPRSYLPLAPEFYRILIDSKNNWVLIKVLKVFAKLAPLEHRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTGLSDYDSAVQLAVEKVRELVVDQDPNLRYLGLQALSVAAPKHLWAVLENKEAVVKSLSDDDLNIKIESLRLLMAMVSESHVADISKVLLNYALKSDPGFCNEILDSILKTCCNNVYEIVVDFDWYVSLLGEMAMIPNCQNGEEIENQLVDIGMRVKDARMELVRVGRDLLIDPALLGNVHLHRILCAAAWVAGEYVEFASNPFELVDALLQPRTSLLPPSIRAVYINSVLKILIFCLDCYLLQNDGSGSLYSGNLDGRQSELFSVKNDTEATELATCGGSNYEQDVGFNPRNTAEPSEDLSVENGIDRAAMHGKTFTSNLLEKKNSMQESIVSLLNRIELIFGPLIANQDVEVLERAQNILSLVQLIKEEIIDNSGQSVDIMEKKDTRVSAIINSMRDAFTTELGPVSISAQGRVAVPDGLVLKDNLDDLQEICGDTELPSSSFGTGGPHLTTNSDASSSNLLNNEESGPLNECTSLIEHRKRHGLYYLPTEKSEIVPDEYPRANDPKSNSNVNDEAAELVKLTEQSLLLKKRTNQTKPRPVVVKLDDGDIAPISVKRPEPRDDSLSGAIKDVLLGNETGPSVSRSYPSDKSSRKQTEKKKLSTNGRSEMKENEVDAEKPDPESPNSSSKNHGHSKHRRHRVKEKSVEGEEHDQRGKKKSGHHHGRRKTHQRAKSPLNVVSQTPVIPDFLL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00786 974 Gene3D - 4 548 IPR011989 -
Spst3g00786 974 MobiDBLite consensus disorder prediction 926 940 - -
Spst3g00786 974 PIRSF AP3_delta 587 968 IPR017105 GO:0015031|GO:0030123
Spst3g00786 974 PIRSF AP3_delta 1 560 IPR017105 GO:0015031|GO:0030123
Spst3g00786 974 MobiDBLite consensus disorder prediction 721 752 - -
Spst3g00786 974 PANTHER DELTA ADAPTIN-RELATED 1 973 IPR017105 GO:0015031|GO:0030123
Spst3g00786 974 MobiDBLite consensus disorder prediction 941 956 - -
Spst3g00786 974 MobiDBLite consensus disorder prediction 836 974 - -
Spst3g00786 974 Pfam Adaptin N terminal region 31 493 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst3g00786 974 MobiDBLite consensus disorder prediction 874 908 - -
Spst3g00786 974 MobiDBLite consensus disorder prediction 836 850 - -
Spst3g00786 974 SUPERFAMILY ARM repeat 30 647 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00786 K12396 - gmx:100815221 1588.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00786 3 11400254 11403178 Spst3g00786 3 11400254 11403178 ECH