Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00785 ATGAAGCCTAAGCAGCATGAAGGGTCCCTTGGTGCTGCAAAATTCTTCATTACTCAATCAACCTTGTTCAACATATTCTCTCATGTTCTGGCATTTGCTTCTGGTTTGCTCATTGGAATCACCATCATCACTTTCTCTCTCAAAAACTTGTCCCTCAACTTTCAATTCCATCAACTTTTCCTTCCATCTTTGTCTCCTCCTCCATTTTCTTCTCCCATCTCAACTTTACTTAACCAGACCAATATCACCATCTTCACCCCAAATGAGTTAAGGGGTTTCTCGAAGCCAACCAAAGCTATGCCTGACATGACAGAGGAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTAGGATTAAGGAATCGCCTTACAAACAGGCCCCAAAGGTTGCATTTATGTTTTTGACAAAAGGGCCTGTCCTTTTGCGTCCATTGTGGGAGAGATTCTTCAAAGGAAATGAAGGATTCTATTCTATCTATGTCCATTCCCATCCTTCTTTCAATGACACAGTCCCTCAAAGTTCAGTGTTTCATGGCCGCAGAATCCCAAGCAAGGAGGTAAGGTGGGGTGAGTTCAACATTGTAGGGGCAGAGAGGCGTCTACTGGCGAATGCACTGCTAGACTTCTCCAACCAACGTTTTGTTCTTCTCTCAGAATCATGCATTCCTTTGTTCAACTTCTCAACCATATACACCTACCTCATCAACTCAACCGAGACCTTTGTGGAAGCCTATGACTTGCCAGGTGCAGTGGGGAGGGGAAGGTACAGCCCCAAGATGAGGCCACTGGTTAGGCTTTCTCAGTGGAGAAAAGGGTCCCAATGGTTCCAAATAGACCGTGCCCTTGCCACTGAGATAGTATCTGACCAGCAATACTTCCCCTTGTTCAACAAACATTGCAGGAATGGATGTTATGGTGATGAACACTACTTGCCAACTTTTGTTGGTATCAAGTTTTGGCGGAGTAACTCCAACAGAACTTTGACATGGGTTGATTGGTCCAAGGGTGGACCCCATCCAGCAAGGTTTATGAGAAGGGATGTAACCGTGGATTTTCTCAAGAGGCTCAGGGATGGAAGCACATGCCACTACAATGGGAAGACCACCAATATTTGCTACCTGTTTGCAAGAAAGTTCATGCCTCATGCTTTAGATAGATTGCTGAGGTTTGCTCCACAGATAATGCACTTCAATTGA 1194 0.4506 MKPKQHEGSLGAAKFFITQSTLFNIFSHVLAFASGLLIGITIITFSLKNLSLNFQFHQLFLPSLSPPPFSSPISTLLNQTNITIFTPNELRGFSKPTKAMPDMTEEELLWRASMVPRIKESPYKQAPKVAFMFLTKGPVLLRPLWERFFKGNEGFYSIYVHSHPSFNDTVPQSSVFHGRRIPSKEVRWGEFNIVGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLINSTETFVEAYDLPGAVGRGRYSPKMRPLVRLSQWRKGSQWFQIDRALATEIVSDQQYFPLFNKHCRNGCYGDEHYLPTFVGIKFWRSNSNRTLTWVDWSKGGPHPARFMRRDVTVDFLKRLRDGSTCHYNGKTTNICYLFARKFMPHALDRLLRFAPQIMHFN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00785 397 Pfam Core-2/I-Branching enzyme 129 355 IPR003406 GO:0016020|GO:0016757
Spst3g00785 397 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 64 387 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00785 Spst-Chr3 11392946 11396425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00785 - - gmx:100815747 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00785 3 11392946 11396425 Spst3g00785 3 11392946 11396425 ECH
Spst3g00785 3 11392946 11396425 Spst4g02758 4 67384861 67388714 PCT