Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00776 ATGACGGAGAAGGTTTCTCGTGGATCATGGTCCACTGGTTTATGCGACTGCTTCTCAGACTGTGGCTCTTGTTGCCTCACTCTTTGGTGTCCCTGTGTTAGCTTTGGAAGGGTAGCTGAGATCCTGGACAAAGGGTCAAACTCTTGTTGTTTGCATGGATCACTGTTCTATTTCCTTGCTATTTTTACTCAGCTGGGAGCCTCTATCTACGCGTGGTTTTATCGTACAAAATTCAGGGAGGTGTATGGGATTGAGGGACACCAATGTAAAGATTGTTTGGTGAGTTTTGTGTGCCCCTGTTTATCCCTTTGCCAAGAGTATCGTGAGCTCAAAGCCCGTGGATTTGACATGTCTGTTGGTAAGTTGGGAAGGGAACGTGCAAATGCGCACACGTGGTGTGATGTCAGCACCGGCAGTGGAGGGTGGCATGAGCCGTTGAGCTGGACTGTGTGTGAGACTGTCTGTGGCATTAGGGTTTGTTTGGAGTGA 489 0.4867 MTEKVSRGSWSTGLCDCFSDCGSCCLTLWCPCVSFGRVAEILDKGSNSCCLHGSLFYFLAIFTQLGASIYAWFYRTKFREVYGIEGHQCKDCLVSFVCPCLSLCQEYRELKARGFDMSVGKLGRERANAHTWCDVSTGSGGWHEPLSWTVCETVCGIRVCLE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00776 162 PANTHER DUF614 FAMILY PROTEIN-RELATED 4 119 IPR006461 -
Spst3g00776 162 Pfam PLAC8 family 10 109 IPR006461 -
Spst3g00776 162 NCBIfam uncharacterized Cys-rich domain 9 111 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00776 Spst-Chr3 11286372 11287148 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00776 - - gmx:100306397 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00776 3 11286372 11287148 Spst3g00776 3 11286372 11287148 ECH