Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00774 ATGTATCAACCAGCCTCAGATCCAACGAAGCCACCGGCCACCGGTTTCCCGGTGAGCTACAGCACTTCAACAACCTTCACCACCAACGACACTTCTTCTTCCTACACCCCACCGGCACCTCCCCAGCCCAAACCTATCATTGAATGGTCCACCGGCCTCTGTGACTGCTTTTCCGATAGTGGAAACTGTTGCTTAACGTGGTGGTGTCCATGTATTACCTTTGGCCGAATTGCAGAAATAGTTGACAGGGGATCCTCATCATGTGGTACGAGTGGGGCTCTGTATACCCTGATTTGTTGTGTGACATGTTGTTCTTGCCTATACTCTTGCTTCTACCGATCCAAGATGAGAAGACAGCATGGTTTAAAGGGAAATGGTTGCACGGATTGCTTGATTCATTGCTGCTGCGAGCCCTGCGCCCTCTGTCAAGAATATCGTGAGCTTGAAAACCGTGGCTTTGATATGACTATTGGGTGGCATGGAAACGTAGAGCAACGAAGTCGGGGAGTAGCCATGACTGCTTTAACAGCACCACCAGCAGAACAGGACATGAACAGTTGA 561 0.4991 MYQPASDPTKPPATGFPVSYSTSTTFTTNDTSSSYTPPAPPQPKPIIEWSTGLCDCFSDSGNCCLTWWCPCITFGRIAEIVDRGSSSCGTSGALYTLICCVTCCSCLYSCFYRSKMRRQHGLKGNGCTDCLIHCCCEPCALCQEYRELENRGFDMTIGWHGNVEQRSRGVAMTALTAPPAEQDMNS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00774 186 MobiDBLite consensus disorder prediction 15 35 - -
Spst3g00774 186 Pfam PLAC8 family 49 147 IPR006461 -
Spst3g00774 186 NCBIfam uncharacterized Cys-rich domain 48 150 IPR006461 -
Spst3g00774 186 PANTHER DUF614 FAMILY PROTEIN-RELATED 46 157 IPR006461 -
Spst3g00774 186 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00774 Spst-Chr3 11262552 11263649 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00774 - - gmx:100306298 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00774 3 11262552 11263649 Spst3g00774 3 11262552 11263649 ECH