Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00773 ATGCAGGTGGCTTACTCACATTTTATGTCTCTACCAACCTCACAAGGTGCACAACCACCCTACAATCAACCCTTTGCCACTTGTTTTCCGGTGGCTTACAACAGCTACAACCCTAATCTCCTAGCCAAGGCTGATTGGTCCACGGGCCTCTTTGAGTGCTTCTCCAACTTCAAAAACTGTTGCATAACGTGCTGGTGCCCATGCGTCACGTTTGGTCAAATTGCAGAGGTTGTTGACAAGGGATCAACGTCATGTGGTGCTAGTGGAGCACTGTATACGATGATTTTTTGTTTAGTTGGTTGTGGTTGTATATACTCATCCTTCTACCGCTTCAAGATGAGACGACAATACATGCTGAAGGAGAGTCCATGTCCGGATTTCTTGGTTCATTGCTGCTGTGAACCCTGTGCCTTGTGCCAAGAATATCGCGAACTTGAAATCCGTGGATTTGACATGGTCATTGGGTGGCAAGGAAATGTTGAGGAAGGGAGCCAGGGTGTACCCATGGTTGCAACTGCTCCAGCAGTTGAACCTATGACTCGTTGA 546 0.4744 MQVAYSHFMSLPTSQGAQPPYNQPFATCFPVAYNSYNPNLLAKADWSTGLFECFSNFKNCCITCWCPCVTFGQIAEVVDKGSTSCGASGALYTMIFCLVGCGCIYSSFYRFKMRRQYMLKESPCPDFLVHCCCEPCALCQEYRELEIRGFDMVIGWQGNVEEGSQGVPMVATAPAVEPMTR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00773 181 PANTHER DUF614 FAMILY PROTEIN-RELATED 43 154 IPR006461 -
Spst3g00773 181 NCBIfam uncharacterized Cys-rich domain 45 146 IPR006461 -
Spst3g00773 181 Pfam PLAC8 family 46 144 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00773 Spst-Chr3 11256504 11261830 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00773 - - gmx:100818949 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00773 3 11256504 11261830 Spst3g00773 3 11256504 11261830 ECH