Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00712 ATGGCAATCACCACCACTCTTTCCTTTTCCTTCTCCTTCTCCACACCCTTTCGTAGCTTCCAATTCCAAACTCCACCATCATCGCACCCCACAAGACTCTCTATCTCATGCCACTCTTCATCACCACCCTCCAGCGACCCTCTCCGCGTGGCCTTCGCCGGCGGCGGAACCGGCAGCAACGTCTACCCAGCGGTGTCCATTGCGGAGGAACTCAAAGCCCTGAACCCCGCGTGTCAGTTTCTCTTCCTTGGAGCCCCCAACAGCGTGGAAAGTGCCGCAATCTCCTCCGCAGGCTACGACTTCGCCTCTGTCCCCTCACCACCCGACACCAACCCTCTCTTCTTCCCTCACCGTTTCTTCAACTCTCTCCTCCAATGCCTCTTCCACCTCCGAAACTTCCAACCCCACGTTCTTGTCGGCACGGGCGGCTACATCTCTTTCCCCGCCTGCCTCGCCGCCAAGCTCCGAGGCACCAACTTTGTCATCCACGAACCCAACTCCGTCCCCGGCTTCTCCAACACCCTTCTCTCCTCCTTTGCCGACGCCATCTTCGTTGCTTTCAACTCCACCCTCGACAACTTTCCCAGAAACAAGTGTTTCGTGTGTGGCAACCCCGTGAGGTTGTCTATTAGGAACCTTGTCTCCAAGGAAACCGCCATGTGTCGTTTTTTTCCGGGTTCGAATTGTGGGGACAGGGTTTTGTTGGTTCTTGCTGGCTCCTATGGCGCCAATGCTGTTAACATTGCGATGCTGAATTTGTACTATCAGATGCTGAGACGGGATAGTGGCTTGCATGTTATATGGCAGACTGGGGTTGAAGCCTTTGATGAAATGGATAGCCTTGTCAAGAGTCATCCACGCTTGTATATGACACCGTTCATGCATTGCATGGATTTGGCATATGCAGCGGCAGACTTGATTGTTTCTAGAGCAGGTGCAATGACTTGCTATGAGATATTGGCAACTGGGAAACCATCAATCCTGATACCTTCGCCAAATTTCTCTGAGGGGAATCAGTTCAGAAATGCATCCTTGATGGCAGACTTAGCTGGTGTGACTGTAATAACTGAGGATGAGCTAGACTCAAGTACACTAGCCATTGCAATTGAAAAGATTTTAAGGGACCAGAAGAAGATGGAAGATATGTCTGAGAGGGCTCTGAAAGCTGCAAACCCCAATGCCTCAGCTGAGATTGCAAAACACATTCTCTCTCTTGTGAATGAATCTACCAAAAAGAAAAGAGATGGCCACAAAGTAGAATCGTAG 1266 0.5103 MAITTTLSFSFSFSTPFRSFQFQTPPSSHPTRLSISCHSSSPPSSDPLRVAFAGGGTGSNVYPAVSIAEELKALNPACQFLFLGAPNSVESAAISSAGYDFASVPSPPDTNPLFFPHRFFNSLLQCLFHLRNFQPHVLVGTGGYISFPACLAAKLRGTNFVIHEPNSVPGFSNTLLSSFADAIFVAFNSTLDNFPRNKCFVCGNPVRLSIRNLVSKETAMCRFFPGSNCGDRVLLVLAGSYGANAVNIAMLNLYYQMLRRDSGLHVIWQTGVEAFDEMDSLVKSHPRLYMTPFMHCMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNFSEGNQFRNASLMADLAGVTVITEDELDSSTLAIAIEKILRDQKKMEDMSERALKAANPNASAEIAKHILSLVNESTKKKRDGHKVES 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00712 421 CDD GT28_MurG 49 401 - -
Spst3g00712 421 Gene3D Glycogen Phosphorylase B; 52 396 - -
Spst3g00712 421 PANTHER UDP-N-ACETYLGLUCOSAMINE--N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE 1 48 406 - -
Spst3g00712 421 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 49 407 - -
Spst3g00712 421 Hamap UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 50 406 IPR006009 GO:0050511
Spst3g00712 421 Gene3D Glycogen Phosphorylase B; 206 390 - -
Spst3g00712 421 Pfam Glycosyltransferase family 28 C-terminal domain 233 391 IPR007235 GO:0016758
Spst3g00712 421 Pfam Glycosyltransferase family 28 N-terminal domain 50 184 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00712 38 411 Glycosyltransferase AT1G73740 48.586 1.40e-122 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00712 K02563 - gmx:100808262 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00712 3 10659850 10663816 Spst3g00712 3 10659850 10663816 ECH