Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00701 ATGCATCGCACGCACAGAATGCGTGTTTCTGTCAGTCTTCTTGCCGACAATTATGTTCCTCTTGAGTTAACTAAGTTGCTATTTTGTGTTGGTTTGTCACTTGAGCCACATTTGTGTGACCTTGTAAGAGAAGGGTTTTTGAGTGATAATAAAATGATTTACGACACAGTGCTGGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAGGTTGGGATATGGAGCATTTGTGAGCTGCTTGTTCATAGTTTTCAGTCTTTGCACTGTGTTTAAGCCTTACTTGGGTCCTGTGCATGTGTTGAACCTGAAGCTCTTCATAGGTGTTGACAGCAAAATGCTGATCACCAGCAGCTCTTCACAAATAGCCGAAGTTGAAAGAAAAGAAAAAAAGAAAGAGGAAATACTCTGCACTTCAGAAGAAAGAACAGAATTTTGCCAAGCAAGGGGAGATATCAGAGTCCATGGAAAATCCTCCACTGTATACATTGCTTCATCTAAGACAAAAATGTTGGAAAAAAACATGTCACGGAGTTTAAAGCCTTATGCAAGGAGGGATGATGTAGATGCAATGATTCTTGTAAGAGAATGGTCGTTGAAGGCAGTGAATGTTAACCAGAAATTCCCCAAATGCACCCAAAATCACAGCATTCCAGCTGTATTGTTTTCTACTGGAGGGTATACTGGTAACCACTTCCATGAATTCACTGACATTGTTATTCCGTTGTTTTTGACTGCTAGACAATTCAATGGAGAAGTACAGTTTATCATAACCAATAATCGTCCTTGGTGGATTTCAAAGCACAAACCACTTCTTAAGAAGCTGTCCAACTACCAGATTATGGCAATTGATGAAGATGATGAAGTTCATTGCTTCTCAAGGGTGAACGTGGGTCTCAAACGGAACCATAAAGAGCTCAGCATTGACCCTCAAAAGTACTCATATTCTATGAAGGACTTCAGGGATTTCTTGAGAAGTTCCTATGCATTGAAGAGATTCAAAGCAACCAAAATAAAAATTGGCCAACAAGGGAAGCCAAAGCTCATGATTCTCTCAAGAAAAAGATCAAGATCCTTTACTAATGCTGATGAAATAGAAAAAATGGCCAAAAGTTTGGGTTTTGTTATCATTATAAGGGAAGCAGGGGAGAGCATGTGGGATTTTGCTCATGTGGTGAATTCTTGTGATGTGTTATTGGGAGTTCATGGTGCAGGTCTCACAAACATACTTTTCCTTCCGGAAAATGCAGTTTTCATTCAAGTTGTGCCTTATGGTGGATATGCATTGGACTGGCTTGCCACAAATGACTTTGGAAAACCCTCAAAGGGTATGAACATAAAGTACTTGGAATACAAAATAAGGTTGGAAGAAAGCACTCTTGTACAACAATACCCGCCAGATCACATATTTATAAAGGATCCCCCATTGATTGAGAAAATAGGATGGGAAAAATACAAGTCTGTGTATTTGGAAAAGCAAAATATAAAGCTTGATGTTGATAGGTTTCGGCCTACATTGCAGACAGCCCTTGAGCTATTGCATCAATAG 1542 0.3949 MHRTHRMRVSVSLLADNYVPLELTKLLFCVGLSLEPHLCDLVREGFLSDNKMIYDTVLAKSFSRYEQKRLGYGAFVSCLFIVFSLCTVFKPYLGPVHVLNLKLFIGVDSKMLITSSSSQIAEVERKEKKKEEILCTSEERTEFCQARGDIRVHGKSSTVYIASSKTKMLEKNMSRSLKPYARRDDVDAMILVREWSLKAVNVNQKFPKCTQNHSIPAVLFSTGGYTGNHFHEFTDIVIPLFLTARQFNGEVQFIITNNRPWWISKHKPLLKKLSNYQIMAIDEDDEVHCFSRVNVGLKRNHKELSIDPQKYSYSMKDFRDFLRSSYALKRFKATKIKIGQQGKPKLMILSRKRSRSFTNADEIEKMAKSLGFVIIIREAGESMWDFAHVVNSCDVLLGVHGAGLTNILFLPENAVFIQVVPYGGYALDWLATNDFGKPSKGMNIKYLEYKIRLEESTLVQQYPPDHIFIKDPPLIEKIGWEKYKSVYLEKQNIKLDVDRFRPTLQTALELLHQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00701 513 PANTHER GLYCOSYLTRANSFERASE 68 511 IPR007657 GO:0016757
Spst3g00701 513 Pfam Glycosyltransferase 61 316 416 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00701 Spst-Chr3 10418852 10422081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00701 - - gmx:100805608 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00701 3 10418852 10422081 Spst3g00701 3 10418852 10422081 ECH