Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00672 ATGGCGAATTGGATCTCCTCCAAACTTAAAGCAGCTGAGAGCATTCTCCACCAGCTCGATCAACAAGCGGCTGAATCGCTTCGCAAGAACGAGGGTTTTCGATCCGAGGAACCGAGCATTGATGCTCCCGCGAAATCAGGGAGCAATGTGTCTCTGAAGGATCAATTAAAGAAGAAACCCTTCGAGAGCAGTGATTATCGTGGAAAATTGCGCAGTGATCCCAATTTTAATGGTCTTAAAGCTACAGCAAGTGCACCCAAACTCTCTCCCAAATCTGGACCTACCCTAACAGATGATGATTGGACTGAACTCCTTAGTGCACCTACACCTACTCAGGCTAAGGTTTCTGCTTCTGGGAGCAATCATGGTAATGGGTTACCTGTACCTCGTGGTTTGAGCAAAAATAGTAGTAGGAAGCAAAAGGGTTTGTCTTCAGGTTCTTTGGTGTCGGATGTGAAGAGGAATGCAAGAAGTGGCAACAGTGGTCCGAGGTCCTTCCAGAAGTCGGACTATGTGAAAGAAGTTAAATTGAGTGGAAAAGCCAGTGATGATGGAAAGGAGTCTACCTCTTCGACTTCAACAGGTAGGAATTCCACAGTTGAATCAGAGATTGATGGTAAATGGGGTAAAGAGCCTGGGTATTCCGACATGGACAATTCTGAGAAGTTCGTGGTAGAGGAAAAGGGAAATGAAGAAAATGAGCATCGGTATAACTACAGGGACATTTCTCCACCAGAATCGTTGCAGGAAGACCATCAAACTTTGGCTGCCGAAACAATACCAGCATTACGGATTGACAAGGTGCAAGAACCTAAGATTGTGGTAGATGTTGACGGCAGTCAATCAAGAAGTGCGATTAAAAAGAGGCATGCGCTTAATTCAATCTCGGGGAATTCAATATCTGATGATTTGAAAACGGGTTCACCCATGGCTAGTGATGGAAGTTCTGATTCAGATTCTGATTCCGGTTCAACATCTGATTCTGAAAGTGAACATGAGAGGGAGGAAAGGAGAAAGAGGAAGGAAAGAATTATGGTTGAAAAAGCAGCAGCTAAAGCAATAAATGCTATCAAGGAACGGGAGAATATGGTGGCCAAATTAGAGGGGGAGAAAGAGAGTCTAGAGAAAATACTCGAGGAGCGAGCTAAACAACAAGCAGTAGAGGCTTCACAGCTTCAGAGTACTACGATGGAAACAATGGACGCTGTTGAGTTAGAAAAGCAGAAGCATAATAATACTAGAATGGAAGTTCTTGCACGATTAGCTAAACTGGAGACTGCCAATGCTGATCTTGCAAGATCCCTTGCGTCTGTGCAGTGGAACCTTGAGATTGAGGTTAAACAAGTAGCGGAACTTAGACAGCAAGTCTCGTCAAAGGAGTTGCTTCATGAAGAGCTCAGAAGGAGAATGAAGAATCCCAGTCAAACTGGAACATCACAAAATCAATTAGCTTCGAAAGGTGTGGAGTTTGAACGGGAAATTCTTGAGGCAGAGCTCTCTTTAATTAATGACAAAGTTACTCAATTGGGGGTAAAGGCAAGAAAGCTGGAATCTGACATTGAAATAACAAGGAAAGAGATGGAAGAGCCAACAGAAGTTGAAGTTGAGCTCAAACAAAGGCTTCGGCAAATGACTGACCATTTAATACAGAAACAAGCAAAGGTGGAATCACTCTCTTCTGAGAAGGCTAGTATTGTATTCAGAATTGAGACTGTGTCAAGGTTGCTGGATGAGAACATGTCAGCATCAGGTGCAACAAATATGAATCCTGCTTCTTCATCAAGTGACTTAGAATCAGGATTATGGGAGCTCTCCAATTCAAAGTTGAAGCCTATGCTAAAAGCCAGAATTCATTCTGGCAAGAGACAGCTTGGATCGTTGCTTCAACAACTAGATTATATTTTTGTGACTGGTGCACTCTTTCTAAAAAGGAACACAACCGCAAAATGGTGGGCTTTGATATATCTTCTTTGCCTTCATTTCTGGGTGTTTTACATTCTTTTGTCACATTCTAGCCCATCAAACGAGGGTAGATCTGGTGCCCAGATCTCATTGGAGAACATTAATAACACTGGAGTATGA 2082 0.4304 MANWISSKLKAAESILHQLDQQAAESLRKNEGFRSEEPSIDAPAKSGSNVSLKDQLKKKPFESSDYRGKLRSDPNFNGLKATASAPKLSPKSGPTLTDDDWTELLSAPTPTQAKVSASGSNHGNGLPVPRGLSKNSSRKQKGLSSGSLVSDVKRNARSGNSGPRSFQKSDYVKEVKLSGKASDDGKESTSSTSTGRNSTVESEIDGKWGKEPGYSDMDNSEKFVVEEKGNEENEHRYNYRDISPPESLQEDHQTLAAETIPALRIDKVQEPKIVVDVDGSQSRSAIKKRHALNSISGNSISDDLKTGSPMASDGSSDSDSDSGSTSDSESEHEREERRKRKERIMVEKAAAKAINAIKERENMVAKLEGEKESLEKILEERAKQQAVEASQLQSTTMETMDAVELEKQKHNNTRMEVLARLAKLETANADLARSLASVQWNLEIEVKQVAELRQQVSSKELLHEELRRRMKNPSQTGTSQNQLASKGVEFEREILEAELSLINDKVTQLGVKARKLESDIEITRKEMEEPTEVEVELKQRLRQMTDHLIQKQAKVESLSSEKASIVFRIETVSRLLDENMSASGATNMNPASSSSDLESGLWELSNSKLKPMLKARIHSGKRQLGSLLQQLDYIFVTGALFLKRNTTAKWWALIYLLCLHFWVFYILLSHSSPSNEGRSGAQISLENINNTGV 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00672 693 MobiDBLite consensus disorder prediction 203 247 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 23 252 - -
Spst3g00672 693 Coils Coil 9 29 - -
Spst3g00672 693 Coils Coil 350 384 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 276 343 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 102 123 - -
Spst3g00672 693 PANTHER GOLGIN-84 1 677 IPR019177 GO:0007030
Spst3g00672 693 MobiDBLite consensus disorder prediction 169 183 - -
Spst3g00672 693 Pfam Golgin subfamily A member 5 475 670 IPR019177 GO:0007030
Spst3g00672 693 Coils Coil 449 469 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 286 323 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 55 69 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 130 167 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 184 201 - -
Spst3g00672 693 MobiDBLite consensus disorder prediction 325 343 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00672 - - pvu:PHAVU_002G329100g 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00672 3 10163463 10170663 Spst3g00672 3 10163463 10170663 ECH