Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00665 ATGACCATGACCTTGAGACCACTTCTCATTCTCACCACCATCTTTACACTCATCTCAACCCTCTCACTGCTCAAGGTTTCAGCAACCGCATCACTCGTATTCTACAACAAGTGTCCGCATCCAGTCTGGCCCGGGATCCAGCCCAGCGCCGGAAAACCCATTCTGGCCCGTGGAGGTTTCAAGCTCGCCCCCAACCGGGCCTACACCCTCCAACTTCCAGCCCTCTGGTCCGGCCGCTTCTGGGGCCGTCACGGCTGTGCCTTTGACTCCTCCGGCCGCGGGCGCTGTGCCACCGGAGACTGCGGCGGCTCTCTCTTCTGCAATGGCATAGGTGGTACCCCACCCGCCACCCTGGCAGAGTTCACCCTCGGAAATGAACAGGACTTCTACGACGTGAGCCTGGTGGATGGGTACAACCTGCCCATCTCCATCACCCCCTTCAAGGGATCCGGAAAATGCAGCTATGCCGGGTGCGTGAGTGACCTCAACAACATGTGTCCGGTGGGCTTGCAAGTGCGGTCAAGTGACAACAAGCGCGTGGTGGCCTGCAAGAGCGCTTGCTCCGCATTCAACTCTCCCAAATACTGCTGCACAGGCTCCTATGGAAGCCCACAGGCCTGCAAGCCCACCGCATATTCCAAGATCTTCAAGACCGCCTGCCCCAAGGCCTATTCCTACGCCTATGATGACCCCACCAGCATAGCCACTTGCACTAAAGCTAACTATTTGCTCACTTTCTGCCCTCATCGCCACTGA 756 0.5807 MTMTLRPLLILTTIFTLISTLSLLKVSATASLVFYNKCPHPVWPGIQPSAGKPILARGGFKLAPNRAYTLQLPALWSGRFWGRHGCAFDSSGRGRCATGDCGGSLFCNGIGGTPPATLAEFTLGNEQDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNNMCPVGLQVRSSDNKRVVACKSACSAFNSPKYCCTGSYGSPQACKPTAYSKIFKTACPKAYSYAYDDPTSIATCTKANYLLTFCPHRH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00665 251 SMART tha2 32 248 IPR001938 -
Spst3g00665 251 Pfam Thaumatin family 36 248 IPR001938 -
Spst3g00665 251 PANTHER OS03G0233200 PROTEIN 16 248 IPR001938 -
Spst3g00665 251 Gene3D Thaumatin 30 248 IPR037176 -
Spst3g00665 251 PIRSF PR5 1 251 IPR001938 -
Spst3g00665 251 CDD TLP-PA 34 247 - -
Spst3g00665 251 ProSitePatterns Thaumatin family signature. 92 107 IPR017949 -
Spst3g00665 251 ProSiteProfiles Thaumatin family profile. 29 250 IPR001938 -
Spst3g00665 251 PRINTS Pathogenesis-related protein signature 79 90 IPR001938 -
Spst3g00665 251 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Spst3g00665 251 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Spst3g00665 251 PRINTS Pathogenesis-related protein signature 31 43 IPR001938 -
Spst3g00665 251 PRINTS Pathogenesis-related protein signature 92 121 IPR001938 -
Spst3g00665 251 FunFam Thaumatin-like protein 1a 30 248 - -
Spst3g00665 251 SUPERFAMILY Osmotin, thaumatin-like protein 32 249 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00665 Spst-Chr3 10083923 10084678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00665 11 249 Receptor kinase-like Gene Family AT5G38280 45.122 1.75e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00665 - - gmx:100784636 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00665 3 10083923 10084678 Spst3g00665 3 10083923 10084678 ECH