LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g00654	ATGAAATCGCAGGACAATTACAAGTTTTTGGGACTACGAGATGTTTCTAAATCTGTGAACCAGAAAGTAAATTTGATTGCTGTTATTCTTGAAACCGGCTTTCCAAAGGCAACAGCGGGCACCGATTACTGTCGTATCCTCAAAATAATTGATGACACACATTACAGAGTCGGATTGGCTGTTAACATTTTTGCTGAAAATACGAAAAAACTCCCCCTTGTTGCTGCTGTTGGGGATGTAATTCAGCTTTGTCGTGTCGTGGTAAAAGCACACAAGGGGGAAGTAAATGCTGTCTTCAACAAAAAAATTTCCTCTTTTGCTTTATATAGAGGCAAAGATGGTGATGATTTAGACCCTTATCAAGTTTCTTCTAAATTTAACCCCAAAGATGAAGACAAGATGCTCGTAGATAGGCTGAGAAAATGGCTGGTCCATTTCCAGCTTCATGAAGATTCTAGTAATTTCCCCTTGTTCAGAGAAATCAAGGAAGAAACTCACATTAATTTGGCATGCAAGATCCTTCACTTCTGTGAGGCTGCGAAAGATGAATGGTTTATCTTTGCTTGGGATGGCACTGATACCCCACCAAATGCCATATGTTCAAAGCTAGAAGATGAACTTAATTCTCCACTTCCTTTACAATTGGAACCTTTGCCTTTGCCAAGAGAGATTTTATGTAGTTTGCCTGCTGTTGGATCCATCCTGAGAATAACTTTTGATGCAGTTGTTGAGAAGAGTGACCTCCACCTTGTAAGCATTGGTAAATGGGTCAAGTTTATCAATTTGCGTCTTGTGGTGCATGCTGGACTATGGCATGGTGTTTTCACCTCTTTTACAAAGCTTCGATATACACCTAACGAAGACCAGCTCATTGTAGAACGTCAAAGGTTTTCTGGTGAGAGGAAAACTTCGAAATCAGGAAGAATGCCTTATTGCAGCTTCCCTAAGCCCTCGTGTATTACAGAAGTCATTCATCATGAGCATTTGAAACGTGTTACGTTAATGGGTGTCCTCACTCATTCAGAGGTGACGGCTAAATTCAAGTGTGTTGTTCGGGTGGTAGCAGCAATGCCATGCCAAGCTGAAATTCTCTGCTCTCCTGCTGGGATATACAGAATGCGGCTAACTCTAGAGGATTCAACTGCAAGGATCCATGCTTATGTAGTTGCACAGGATGGGGAGACCCTTTTTGATGGTTATCCGGGCGTTGAAAAGTTGACAAGGAAGCTGAATAGATTACTGGGAGTAGCTGAATGTGATGCTAGCAATGATGGGGAAAAGGTTACTCCAAGAAATCCACCATGGATTTGTGTTTGTCTCATGTCATACTATGTCTGCAAAGCTGATGTCTGGGGCAGTAGAAACTTCAGAATATTTGACACCAAAATAGTGGGAGATACATGA	1404	0.4152	MKSQDNYKFLGLRDVSKSVNQKVNLIAVILETGFPKATAGTDYCRILKIIDDTHYRVGLAVNIFAENTKKLPLVAAVGDVIQLCRVVVKAHKGEVNAVFNKKISSFALYRGKDGDDLDPYQVSSKFNPKDEDKMLVDRLRKWLVHFQLHEDSSNFPLFREIKEETHINLACKILHFCEAAKDEWFIFAWDGTDTPPNAICSKLEDELNSPLPLQLEPLPLPREILCSLPAVGSILRITFDAVVEKSDLHLVSIGKWVKFINLRLVVHAGLWHGVFTSFTKLRYTPNEDQLIVERQRFSGERKTSKSGRMPYCSFPKPSCITEVIHHEHLKRVTLMGVLTHSEVTAKFKCVVRVVAAMPCQAEILCSPAGIYRMRLTLEDSTARIHAYVVAQDGETLFDGYPGVEKLTRKLNRLLGVAECDASNDGEKVTPRNPPWICVCLMSYYVCKADVWGSRNFRIFDTKIVGDT	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g00654	467	SUPERFAMILY	Nucleic acid-binding proteins	158	267	IPR012340	-
	Spst3g00654	467	CDD	hPOT1_OB1_like	7	142	-	-
	Spst3g00654	467	PANTHER	PROTECTION OF TELOMERES 1	4	463	IPR028389	GO:0000723\|GO:0043047
	Spst3g00654	467	SMART	Telo_bind_a_2	9	144	IPR011564	GO:0000723\|GO:0000781\|GO:0003677
	Spst3g00654	467	Pfam	Telomeric single stranded DNA binding POT1/CDC13	14	143	IPR011564	GO:0000723\|GO:0000781\|GO:0003677
	Spst3g00654	467	Gene3D	-	8	153	IPR012340	-
	Spst3g00654	467	SUPERFAMILY	Nucleic acid-binding proteins	8	146	IPR012340	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g00654	-		-	gmx:100800003	597.43

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst3g00654	3	10006126	10010168	Spst3g00654	3	10006126	10010168	ECH