Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00436 ATGGCTGGTTGTCGATGGCATATTGGTGTTGTTTTTGGGAGAACCATTTTGTTTATCTTAATAATCAACATTGCAAATGTTCAGCCTCATTCTTTTGACTGCCCCAACTTCAGTTCAACTTATGTAAAGAAACTAAAGTTGGAAGGTAATGCTTCCACCTTAGGTTCTGCTATCCAACTCACAACGAACGCAACGGAAAACGGGTCTGGGACAGTAGGAAGAGTGACATATCCAGAGCAGATTAGTCTTTGGGACAATAGTTCAGATGAACTAAAAGACTTCACTACCAACTTTTCCTTTGTTGTTTCCTCAAATCAGAATCATTATGGTGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTTCCCTCCGCGGATGATGAAAACGTAAGAGGAGGAGGCCTTGGCATAGGGCTTGTCGATGGTAGGGTAAATCTCATTGACCCTGATTATCAATTTGTAGCAGTGGAGTTTGACACTTACTCAGACAACTGGGACCCATATGGCTCACATGTAGGTGTAAATATCAATGCTATGAAGTCTCAAATATTCGAGACATGGTCGCCAAATACGGGGAAAGTATGTAACTGTAGTATTGTATACAATTCTAGAAAAAACATTTTGATAGTTTCTTTCACGAGATACAATTTTGGTAGTGGGAATATAACACAAAGTATTCAGCACCTTGCATACCCCGTTAATATCAGAGATCAATTACCAAAGTCGGTTATTGTCGGCATATCAGCTGCGACAGGTGAATATGCTGAGGAACTTACCTTGCTCTCATGGTCATTTAGTACACGTACAAGACCACCAATTCAGGTTAATTCGAAGAAGAAAAACAAGTTAATCAGCTCAATAATGTTGCAGGGAATTGGAATTGGGACAGGTTTGTTTTTTATTTTATCAGGGTTGGTCTATATTTTGTTATGGAGGATGAATAAAGGAAAAGAAAAAAGCATTTCTCGTCTGGAGATGGATGATGAACTCCACACGAGACCTAAGGAGATTAGCTATCAAGAATTGGCCGCTGCAACCTGTTGGAAGAGTGCTTCAGGACTGAAACATGTCCACATATTTTTTTAA 1086 0.3978 MAGCRWHIGVVFGRTILFILIINIANVQPHSFDCPNFSSTYVKKLKLEGNASTLGSAIQLTTNATENGSGTVGRVTYPEQISLWDNSSDELKDFTTNFSFVVSSNQNHYGDGLAFFLASPNLPSADDENVRGGGLGIGLVDGRVNLIDPDYQFVAVEFDTYSDNWDPYGSHVGVNINAMKSQIFETWSPNTGKVCNCSIVYNSRKNILIVSFTRYNFGSGNITQSIQHLAYPVNIRDQLPKSVIVGISAATGEYAEELTLLSWSFSTRTRPPIQVNSKKKNKLISSIMLQGIGIGTGLFFILSGLVYILLWRMNKGKEKSISRLEMDDELHTRPKEISYQELAAATCWKSASGLKHVHIFF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00436 361 CDD lectin_legume_LecRK_Arcelin_ConA 31 268 IPR001220 GO:0030246
Spst3g00436 361 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 26 298 - -
Spst3g00436 361 Pfam Legume lectin domain 31 277 IPR001220 GO:0030246
Spst3g00436 361 Gene3D - 28 282 - -
Spst3g00436 361 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Spst3g00436 361 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 272 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00436 Spst-Chr3 7468826 7469911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00436 16 346 Receptor kinase-like Gene Family AT5G10530 30.814 1.64e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00436 - - vum:124829843 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00436 3 7468826 7469911 Spst3g00436 3 7468826 7469911 ECH