Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00412 ATGTCCCGAAACGGCGACGTAGAGGAAGAGATCGCGGCCACGCTAAGAAACAGAACAGACCCTTTCTTGGTGGCGTGCCGGGGCTTCAGCTTCATCACCTCTCTCGCCGCCATTCTCTGCATCGCCGTCAACGTTCTCTCCGCCGTCCGTTCCTTCAAGCACGCATCTGACATTTTCGACGGCATATTCCGGTGCTATGCGGTTATCATAGCGGCTTTCGTGGTCCTCGCCGAGACCGAATGGAGTTTCATCCTCAAGTTCTCTAAGGTTTTGGAGTATTGGGCCGCCAGGGGTATGCTGCAGATCTTTGTTGCTGTCATGACAAGGGCTTTTCCTGACTATATTGGAGACCGAAAGAACCTTTTTCTTCTTCAGAGCATAGCGAGTTATTTGCTACTTGCCTGTGGCGTTGTTTATGTTTTTTCAGTAAGATCATTGAAGAGAAACAATCTATTAAGATACCTTTACTTGCGTAAAGTGTTCTATTGCCAAGCAGACTTGGGTATCCTGTGCATTGGTTTTCTTAAACGTGCCCGCCAGAAACAGGAGATTACAAGAGAGCAAGCAGCCAAGGATCTCGAGGAGTTGGAACGGCGCAGGGAAGAACTTGAACAACTACTCCTTGACCCAAGAGTTTAA 639 0.4867 MSRNGDVEEEIAATLRNRTDPFLVACRGFSFITSLAAILCIAVNVLSAVRSFKHASDIFDGIFRCYAVIIAAFVVLAETEWSFILKFSKVLEYWAARGMLQIFVAVMTRAFPDYIGDRKNLFLLQSIASYLLLACGVVYVFSVRSLKRNNLLRYLYLRKVFYCQADLGILCIGFLKRARQKQEITREQAAKDLEELERRREELEQLLLDPRV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00412 212 PANTHER OS07G0118300 PROTEIN 9 209 - -
Spst3g00412 212 Coils Coil 179 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00412 Spst-Chr3 7214728 7218216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00412 - - pvu:PHAVU_002G213000g 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00412 3 7214728 7218216 Spst3g00412 3 7214728 7218216 ECH
Spst3g00412 3 7214728 7218216 Spst6g00604 6 5437365 5439604 PCT