Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00141 ATGACTGGAAGTGGAAGAACGACCGTTCGGAGCAGAGCAAAATCCCTCTCCGACGCCGACGCTTACGCCGATGCCAGTTCTCATCGAAAAAGGAGACCTCTGTTGAATCGACGCAGAGAGAGAAGCAAATACGGAAGCTCCATCCCGATATTCAACAGTACCAATCTCAAAATGGTGCTCGGTATCTGCTTCGTGGCATTCTTTATCATCTTCTTTATGATCCGCCACCTATTGAATTTCGCCACGGAACCGAAGCTTCCTCGTACCGTTACACCATTTCCCGCGCCAAAGATAATGGACCTTCCTCAGTTTCAAGGCGAGCACAGGGAGAGTTTGTATTGGGGAACTTATCGGCCTAATACGTATCTCGGAATTCGAGCCAGGACTCCCAAATCTTTGATGGCTGGGTTAATGTGGATTGGTGTGAAGGATGGCAGATATCACTTGCGGCATGTATGCAGACATGAGGATGACCTAAATACTTATGGTTGGAGAAAGCACAATGGACGTGATTTTGGACATCAAGTACTGGTTGACCATGGCATGACCTTGACTACTGGGTTTTTAAAATCAAAAGAGGAAGGCAGTGGTTATGGAGGGGATTGGGCAGTTCGAATTAATGTGGAAATTGACAAATCTAAGTGGAATGAGGAGTTTGGGAGAGGGGGTCAGCTCTTCTTCTATTTGGCTGATGAAGCTGGTAATGCTCTAGACCTAGGTGGAGAAAACTTGAACATTCATGAGGATTCTTTGCTTGCATCTGGCACTCGGGAAGATATTGGAGATTGGCAGCTACATTTAAAATCAATGGATGATTTGGAGCTGCATTATTCAGGATTTCGCACGCCTCACTATCACAATTTGTCTGATCTTGTAGAGGAAAGTCTTGCATCACAAATAAGAAAGCATGCTCGACTGCAGCTATCTGACTCATTAGATGATGCTCCTAATGTTTTAGTTTTTCAGATTATTGGTGGATTTCCTTTCACAACAGATATTGTATTCATCTCTGGAACTGATTTAGAAAGTTCTAGAGAAGAAGAGCGTGTCAGTATGCTTACAGGTACCTCACTTTCCAATCAACTGAAATATAAAGAACAGGAATTTGATGAAAAGTTTGAGAAAATTTTCAATTTGGCCGAGAAGGTGGATTCTGAATCCATATCTGTTGGTAAGGCGGCCATTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCTTTCAAATTTTTTTAATCTTAGAGAACATGTCAATTATATATCTTATTGGCCTGCTGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGCTGGGATATTCATATCTCCTTGGATATCATTGGACATTGGTTAGATTTGATGAATGTTGATGGATGGATACCACGTGAGCAAATTCTGGGGGCTGAAGCACTGAGTCGGGTCCCAGAGGAATTTGTTCCTCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAATGATATAATTAATGGCTTGAAGAATGATGAGTTTACTGCAATGGATAGAAGTGAAATCTCTCTTTTCCTGGAACGTGCCTTTGTTCGATTGGAAGCATGGTTCCATTGGTTCAATACAACTCAATCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGAGACAATAGGACAATGCGGGAAATAAATCCCAAGACACTGTCCTCTGGATTGGATGATTATCCACGAGCTTCACACCCAAGTGAAGATGAACGCCACTTGGATCTTAGATGTTGGATGTTACTTGCAGCAGAGTGTATGCATTCCATTCAAGAATTGTTGGATATGGAAAGCAAACCTGGCATGGATTATGGTTCTACTGCTAAATTGCTATTGAATTTTGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGTGCTTACTTTGATTTTGGAAATCATACCGAAAAGGTTCAACTTAGATGGAAAGAACTAGAGGCTGGAAACTATGCTACTCGACAACTTGTCCGGGATGTTACAGAGATACCTGTATTGAGATTGGTTCCTCACGTTGGTTATGTTAGTTTATTCCCATTCATGGGGAGGATCATTCCATCTGGATCATGGATACTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTATGGACCAACTATGGACTACGTTCTCTGGCCAAAACAAGTTCCTTGTACATGAAACACAACACAGAGCACGACCCTCCATACTGGAGAGGTCCAGTTTGGATAAACATGAATTACAGAATCCTTTCAGCGCTCCACCATTACTCCAAAGAGAATGGACCATATCAGGAGAAAGCTAAAGCTGTCTACGAAGAATTGAGAAGCAATTTAATTAGAAATATAGTGCGCAATTATCAACAAAGTGGATTTTTGTGGGAACAATATGATCAGATTAAGGGTAAGGGAAAAGGGGCACATCCTTTTACTGGCTGGACATCGCTTGTATTATTAATCATGGCGGAAGCATATGGCAATATTTAG 2568 0.4178 MTGSGRTTVRSRAKSLSDADAYADASSHRKRRPLLNRRRERSKYGSSIPIFNSTNLKMVLGICFVAFFIIFFMIRHLLNFATEPKLPRTVTPFPAPKIMDLPQFQGEHRESLYWGTYRPNTYLGIRARTPKSLMAGLMWIGVKDGRYHLRHVCRHEDDLNTYGWRKHNGRDFGHQVLVDHGMTLTTGFLKSKEEGSGYGGDWAVRINVEIDKSKWNEEFGRGGQLFFYLADEAGNALDLGGENLNIHEDSLLASGTREDIGDWQLHLKSMDDLELHYSGFRTPHYHNLSDLVEESLASQIRKHARLQLSDSLDDAPNVLVFQIIGGFPFTTDIVFISGTDLESSREEERVSMLTGTSLSNQLKYKEQEFDEKFEKIFNLAEKVDSESISVGKAAIGNLLGGIGYFYGQSKIALSNFFNLREHVNYISYWPAELYTAVPSRSFFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEALSRVPEEFVPQHPTNGNPPTLFLALNDIINGLKNDEFTAMDRSEISLFLERAFVRLEAWFHWFNTTQSGKQMSSYYWHGRDNRTMREINPKTLSSGLDDYPRASHPSEDERHLDLRCWMLLAAECMHSIQELLDMESKPGMDYGSTAKLLLNFELLNQMHFDDAYGAYFDFGNHTEKVQLRWKELEAGNYATRQLVRDVTEIPVLRLVPHVGYVSLFPFMGRIIPSGSWILEKQLELISNRSLLWTNYGLRSLAKTSSLYMKHNTEHDPPYWRGPVWINMNYRILSALHHYSKENGPYQEKAKAVYEELRSNLIRNIVRNYQQSGFLWEQYDQIKGKGKGAHPFTGWTSLVLLIMAEAYGNI 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00141 855 Pfam Glycosyl hydrolase family 63 N-terminal domain 111 272 IPR031631 -
Spst3g00141 855 SUPERFAMILY Six-hairpin glycosidases 357 853 IPR008928 GO:0005975
Spst3g00141 855 Gene3D - 381 854 IPR012341 GO:0005975
Spst3g00141 855 FunFam Mannosyl-oligosaccharide glucosidase GCS1 99 380 - -
Spst3g00141 855 Pfam Glycosyl hydrolase family 63 C-terminal domain 354 850 IPR031335 -
Spst3g00141 855 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 63 852 IPR004888 GO:0004573|GO:0009311
Spst3g00141 855 Gene3D - 99 380 IPR038518 -
Spst3g00141 855 MobiDBLite consensus disorder prediction 1 40 - -
Spst3g00141 855 FunFam mannosyl-oligosaccharide glucosidase 381 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00141 Spst-Chr3 2552468 2560875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00141 74 852 Glycoside Hydrolase AT1G24320 57.875 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00141 K01228 - gmx:100795691 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00141 3 2552468 2560875 Spst3g00141 3 2552468 2560875 ECH