Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00140 ATGTTCAACATCAAAGCTGTGCTCAGTATCGTCGTGTTTCTGAATATGAGTCACGTCGATTCAGCTGCAGAACACCGTCTTCCTCGCGTTGTCACGCCGCTTCCTGCGCCTAAGATAACCGACCTTCCTCAGTTTCAAGGAGAGCACAAGGAGAGTTTGTATTGGGGAACGTATCGTCCTCAGGTTTATCTCGGAGTTCGTGCCAGGACTCCAAAGTCTTTGATTGCTGGATTAATGTGGATTGCCGTGAAGGATAGCAAATATCACTTGCGGCATGTGTGCAAACATGAGGATGACCTGAGTACTTATGGTTGGACAATGCATAATGGACGTGATTTTGGACATCAAGTGCTGGTTGACCATGGAATGACCTTGACTACTGGATTTTTAAAATCAAAAGAGGAAGGCAGTGGCTATGGAGGGGATTGGACAGTTCGAGTTTGTGTGCAAGTTGATCAGTGA 462 0.4632 MFNIKAVLSIVVFLNMSHVDSAAEHRLPRVVTPLPAPKITDLPQFQGEHKESLYWGTYRPQVYLGVRARTPKSLIAGLMWIAVKDSKYHLRHVCKHEDDLSTYGWTMHNGRDFGHQVLVDHGMTLTTGFLKSKEEGSGYGGDWTVRVCVQVDQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00140 153 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 9 150 IPR004888 GO:0004573|GO:0009311
Spst3g00140 153 Pfam Glycosyl hydrolase family 63 N-terminal domain 52 150 IPR031631 -
Spst3g00140 153 Gene3D - 40 153 IPR038518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00140 Spst-Chr3 2529716 2531949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00140 24 150 Glycoside Hydrolase AT1G24320 62.992 4.31e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00140 K01228 - gmx:100795161 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00140 3 2529716 2531949 Spst3g00140 3 2529716 2531949 ECH