Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00132 ATGACTAATCCGCAAATACGAACAGAAGAATCCCCTCAGAGTCAAACCCCGCTTCTAATTTCAATTCAACAGCAACCAGCAGAGGAAAATGGGGATAATAAGACAAATAACAATAATCACGAGAATAAGAAGAACGATGACGGTGGTGGAGAAAATAATGATGATGAGGAGGATGAGAGTAAAGTGGAGGAGAGCTTGGCACGGTTGGAGCGGTTTCTGACGGTGTTAGGGTTCAACCAGCACTCGGCGTTGAGTTTGGTGATTTCTTGGAGCTTGTTCGCGGCGGTGGGAGTAGCGGCGCCGCTGGTGGCGCTGTCCATTTGCGAGTGCCCGGAATGCGATAGGTACGAGATCAAGAGCTTCGAGATGGTGATCGTGGCGTTTCAGGCGAGTCTTGCCGCCGTCTCCTTGCTCTGTCTCTCCCACAACCTCCGCAAGTACGGTCTCCGCAGGTTCCTCTTCGTTGACCGCTACTCCGGAAAGATGCATTGCTTTCACCGCGAGTACGTCGCTCAGATTTCGGGATCTATGCGCTTGCTTTTTCTGTGGGTTTTACCATGTTTCCTTCTGAAGACCGCTCGAGAAGTCATTCGCATTTTCTATGTTCAACATGGATCCTGGTGGCTCTCACTCGCTATTCTGTCAGCTTTGATTATATCATGGACTTATATGAGTACAATCTCTCTGTCAGCCTGCATTTTATTTCACTTGGTCTGCAGTTTGCAAGTGATCCATTTTGATGATTATGGGAAGCTCTTGCAAAGGGAAAGCGATGTTTTAGTTTTTATGGAAGAGCACATTCGGTTACGTTATCATCTCTCCAAGATAAGTCATAGGTTCAGAATCTATCTGCTTCTGGAGTTCTTGGTTGTCACAGCTAGCCAGGTTGTGACGCTTTTGCAGGTCACTGGATATGGTGAAATGCTGACCTTCATCAATGGTGGAGATTTTGCTGTATCCACACTTGTTCAGGTGGTGGGCATCATTATTTGTTTGCATGCCGCAACAAGAATTTCTCATAGAGCTCAAGGCATTGTTTCCCTTGCAAGCAGGTGGCATGCAATGCTAACATGCACATCTTCCGATGCACCACAATTGCGAAGCTCTGCTAGTGCAGGGAGCTTGGAGGCTGCAAACCATTTAAATGCGATACATATAGACTATTCTGAAAGTGATCTAGAGTCAATGGATTATGCTGGAATGTTTTCAAATACCCAATGGACTTCCTATGTGTCTTCACATCATAGGCGACAAGCTTTTGTGATGTATTTGCAGACAAATCCAGGAGGAATCACAATATTTGGATGGACAGTGGATCGTTCTCTAGTCAACACTATATTTTTCCTTGAATTGAGTCTGGTTACATTTGTTCTCGCATACTTATACCGTTCTCTTGTTGAATTGCGTGTAACTTTGCACTTGGAGTGTTGGAAGCAGAAGGCTTTGGACACGGCAACCATTCGCTTTGGGTGTGCTAGTGTTGATGGAGAGTCATCTTACCAACCAATGCAAATTCCTGTGAAGTGTTAG 1530 0.4556 MTNPQIRTEESPQSQTPLLISIQQQPAEENGDNKTNNNNHENKKNDDGGGENNDDEEDESKVEESLARLERFLTVLGFNQHSALSLVISWSLFAAVGVAAPLVALSICECPECDRYEIKSFEMVIVAFQASLAAVSLLCLSHNLRKYGLRRFLFVDRYSGKMHCFHREYVAQISGSMRLLFLWVLPCFLLKTAREVIRIFYVQHGSWWLSLAILSALIISWTYMSTISLSACILFHLVCSLQVIHFDDYGKLLQRESDVLVFMEEHIRLRYHLSKISHRFRIYLLLEFLVVTASQVVTLLQVTGYGEMLTFINGGDFAVSTLVQVVGIIICLHAATRISHRAQGIVSLASRWHAMLTCTSSDAPQLRSSASAGSLEAANHLNAIHIDYSESDLESMDYAGMFSNTQWTSYVSSHHRRQAFVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLAYLYRSLVELRVTLHLECWKQKALDTATIRFGCASVDGESSYQPMQIPVKC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00132 509 MobiDBLite consensus disorder prediction 1 61 - -
Spst3g00132 509 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 33 459 IPR021924 -
Spst3g00132 509 MobiDBLite consensus disorder prediction 34 50 - -
Spst3g00132 509 MobiDBLite consensus disorder prediction 1 33 - -
Spst3g00132 509 Pfam Protein of unknown function (DUF3537) 65 449 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00132 Spst-Chr3 2340474 2344855 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00132 - - gmx:100813872 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00132 3 2340474 2344855 Spst3g00132 3 2340474 2344855 ECH
Spst1g01908 1 27343846 27345474 Spst3g00132 3 2340474 2344855 PCT