Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00129 ATGAGATACATAGAAGAAAAAGGGTACTATAACAACAACGGTTCATCACAAGGGATCACGAGTAACAGTGTGTATTCAGAGTTTCACAAAGGAAAGGATGCTACTCGGGTCTCCCACCACAATCGAACAACTATGGGAAAACCAACCCCTTCTAAGTGGGACGATGCACAAAAGTGGCTTGTGGGGTTGTCAAAAGGAGGAGAGAAAAGTCACACAAAAAACAAACCAAGAAACTCAAATGCAGATGATTTGAGACTGATAGCCCCTGTGCCACAGAAGGAGCATGATTACTCAAGTAGTGAAAAGGAAGAGGAAGAAAATTATGCATGTCATGGTTTCATGACTACTGCTAGTGTCGATGTTCCTGCTGCTCAATATGAAGTTGAAGCCAAAAGGGTAGAATGTGATGAGTCAAACTGGAGAAGCAATATGCCTTCAGAAAACACAATTCAAGTCCAATCAATATGTTTCAGAGACATGGGGACTGAGATGACACCAATTGCTAGCCAAGAGCCTTCAAGAACTGGCACCCCAATTAGAGCCACAACTCCTACCAGTCGAAGTCCCATTCATTCAGGGACTTCAACTCCAATGAGGGGTCAAAATGGGTTGCAAGTTGCTGAGGGTGGCCATGACATTACTAGGCACTGTGCAGAAGGATCAACAAGCCCTTGCACGAGGATAGAGGATCAAGCTAGAAAGATGAGTCCTCTAGAAAGCCGGGCAATGGCTTGGGATGAGGCTGAACGTGCCAAATATATGGCCAGGTTCAAGCGTGAAGAGGTGAAGATTCAAGCATGGGAAAATCACCAGATTAGAAAAGCTGAAATGGAGATGAAGAAAATGGAGGTGAAAGCTGAGAGAATGAAAGCTTTGGCACAAGAAAGGTTGGCAAATAAAATGGCTTCGACTAAGAGGATAGCTGAGGAGAAACGGGCAAATGCACAAGTGAAGCTGAATGACAAGGCTTTGAGGACTACCGAAAGGGTTGAGTATATACGAAGGACAGGACATGTGCCTTCTTCTTTCTCTTTCAACTTCAAGTTGCCTTCCATGTGTTGGTAG 1065 0.4432 MRYIEEKGYYNNNGSSQGITSNSVYSEFHKGKDATRVSHHNRTTMGKPTPSKWDDAQKWLVGLSKGGEKSHTKNKPRNSNADDLRLIAPVPQKEHDYSSSEKEEEENYACHGFMTTASVDVPAAQYEVEAKRVECDESNWRSNMPSENTIQVQSICFRDMGTEMTPIASQEPSRTGTPIRATTPTSRSPIHSGTSTPMRGQNGLQVAEGGHDITRHCAEGSTSPCTRIEDQARKMSPLESRAMAWDEAERAKYMARFKREEVKIQAWENHQIRKAEMEMKKMEVKAERMKALAQERLANKMASTKRIAEEKRANAQVKLNDKALRTTERVEYIRRTGHVPSSFSFNFKLPSMCW 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00129 354 MobiDBLite consensus disorder prediction 1 85 - -
Spst3g00129 354 Coils Coil 272 292 - -
Spst3g00129 354 MobiDBLite consensus disorder prediction 9 28 - -
Spst3g00129 354 Pfam Remorin, C-terminal region 239 341 IPR005516 -
Spst3g00129 354 PANTHER OS02G0116800 PROTEIN 37 353 - -
Spst3g00129 354 MobiDBLite consensus disorder prediction 167 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00129 Spst-Chr3 2287873 2290213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00129 - - gmx:100813335 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00129 3 2287873 2290213 Spst3g00129 3 2287873 2290213 ECH