Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00124 ATGACGATTGATAATGCTGAGAACCAGGCCATCAACGATTGGCTTCCTATCACTGCTTCCCGGAAAGCCAAATGGTGGTACTCAGCTTTCCACAACCTCACGGCCATGGTTGGTGCCGGTGTCCTCACCCTGCCATATGCCATGTCTATGATGGGCTGGGGTCCAGGGACTGTTATCGTGCTACTATCATGGATCGTGACCTTGTTTACCCTATGGCAAATGGTGGAGATGCATGAAATGGTGCCTGGTGTGAGATGCGATAGGTATCACGAACTGGGGCAGCAAGCCTTTGGAGAGAAGTTGGGTCTCTACATCGTGGTTCCTCAACAGCTACTTGTTCAGGTTGGCACATGCATTGTTTACATGGTGACAGGAGGAGTCTCACTGAAGAAGTTTCACGAGACAGTTTGCCCCTCCTGCCAAACCATTAGGACCTCCTATTGGATTGTTATCTTCGCTTCTGTAAACTTCGCTCTCTCTCTTTGTCCCAACTTCAACTCTATTTCTGCAGTCTCCTTTGCTGCAGCCGTCATGTCTCTCACTTATTCAACCATTGCTTGGGCTGCTTGCCTTAAGAAGGGCGTTGTACCAGATGTGGACTATAGCTACAAAGCCCGCGACACTGCGGATGGTGTGTTCAACTTCATGACTGCCATGGGAGAAGTAGCATTCTCTTATGCAGGTCACAATGTGGTTATGGAAATCCAAGCAACAATACCTTCTACACCTGAGAAGCCTGCCAAGATAGCAATGTGGAAAGGATGTGTGGTTGCATATCTTGGAGTTGGCTTTTGCTACTTTCCTGTGGCCTTCATTGGATACTATATATATGGAAACTCTGCCGATGATAATATCCTCGTCACACTAGAGAAACCTATTTGGCTTGTTGCAGCAGCTAACATGTTTGTTACTATTCATGTTATTGGAGGCTATCAGGTATTCTCAATGCCGGTGTTTGATATGATGGAAACCTTTTTGGTGAAGCAAATGAAATTTCCTCCAAGTTTTACACTCCGCTTTGTTGCTCGCACTCTATTCGTAGCAATGACAATGATTGTTGGCATATCTATCCCTTTCTTTGGCTCTCTTCTTGGATTTCTTGGAGGGTTTGCCTTTGCCCCAACATCATTCTTTCTACCCTGTATCATTTGGCTTAAAATCCACAAACCAAAGAAATTTAGCTTGTCTTGGATAGTCAACTGGGTATGTCATTACATGAGATTCTCAAAATTCTTTCTTAGGATTCTCATCGTGTCTAGTAATTTACTGAGACAAACTTTTCTTATTTACATTGCAGATATGCATTGTGCTTGGGGTACTGCTGATGCTGCTAGCTCCAATTGGTTCGTTAAGAAAAATCATCATTTCAGCCAAGCACTACAAGTTCTTTTCATGAGCTGCTTAGAATCAACTGCTTAG 1419 0.4426 MTIDNAENQAINDWLPITASRKAKWWYSAFHNLTAMVGAGVLTLPYAMSMMGWGPGTVIVLLSWIVTLFTLWQMVEMHEMVPGVRCDRYHELGQQAFGEKLGLYIVVPQQLLVQVGTCIVYMVTGGVSLKKFHETVCPSCQTIRTSYWIVIFASVNFALSLCPNFNSISAVSFAAAVMSLTYSTIAWAACLKKGVVPDVDYSYKARDTADGVFNFMTAMGEVAFSYAGHNVVMEIQATIPSTPEKPAKIAMWKGCVVAYLGVGFCYFPVAFIGYYIYGNSADDNILVTLEKPIWLVAAANMFVTIHVIGGYQVFSMPVFDMMETFLVKQMKFPPSFTLRFVARTLFVAMTMIVGISIPFFGSLLGFLGGFAFAPTSFFLPCIIWLKIHKPKKFSLSWIVNWVCHYMRFSKFFLRILIVSSNLLRQTFLIYIADMHCAWGTADAASSNWFVKKNHHFSQALQVLFMSCLESTA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00124 472 FunFam Lysine histidine transporter 1 18 425 - -
Spst3g00124 472 Pfam Transmembrane amino acid transporter protein 22 415 IPR013057 -
Spst3g00124 472 PANTHER OS05G0424000 PROTEIN-RELATED 23 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00124 Spst-Chr3 2205615 2207519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00124 6 403 Organic Solute Cotransporters AT1G24400 71.608 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00124 K26385 - gmx:100809608 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00124 3 2205615 2207519 Spst3g00124 3 2205615 2207519 ECH