Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02969 ATGGAGAGTGCCGAGACGCACAGAGCAAAAGAAGAGAGAGGAAAGAGAGTAGCCATGTCAAAGGTATCATGCATAGTAAGAATGATAACGATGATAGTGGTGATGGTGATGGTGACAGTGACGAAAGCAGCTTCAATGAACTACGCAGAAGCATTAGGAAAGAGCATTCTCTTCTTCGAAGGTCAGAGGTCTGGCAAGTTGCCACCTTCTCAACGCATGAAATGGAGGAAAGACTCGGCACTTTCTGATGGCTCAGATATTCAAGTAAACAAACTCTCCATGGATTTGGTAGGTGGATACTACGATGCTGGCGACAATGTGAAATTCAATTTTCCAATGGCATTCACGACGACGATGCTGGCGTGGAGTGTGGTTGAATTCGGAGATTCGATGGGCTCAGAGCTTAAAAATGCATTGGATGCAATCAGGTGGGGAACTGATTATTTCATCAAAGCCACCAAATTTCCTGATAAGGTTGTGGCAGTAGTGGGCGATCCCGTTAAGGATCACAATTGTTGGGAGAGACCAGAAGACATGGACACTCCTCGAACCTCGTACTATGTAACTCAAAACAAACCAGGTTCAGAAGTTTCTGCTGAGATTGCAGCAGCACTTGCAGCATCTTCCATTGCATTTAGGTCAACCGATGCTTCCTATTCCAACTTTCTTCTCAATAGGGCTATTCAGGTGTTTGACTTTGCAAATAAGTATCGTGGATCTTATAATCTCAGCGTAGGTGAGGGAGCATGTCCATTCTACTGTGATTATAGTGGCTACGTGGATGAGTTGATCTGGGGTGCGGCATGGTTGTATAAAGCCACGGAGACAACCAGTTACTGGGATTTTGTAAAAGCAAACATTCAATCTATAGACAATAATAATTTTGAATTTGGATGGGATTGCAAGAATGCTGGTATAAATGTACTTGTTTCTCAGAAAATACCTTGTGGGCAAGAAGTTGCGGATCCAACTTTGCTCATAAATATTGCAAAAAGTCAGGCTGATTACATATTGGGAAAGAACCCTCTGGGAATGTCATACATGGTGGGATATGGAGACAAGTTTCCTGAAAAGATACATCATCGTGGTTCTGTGGTGCCATCTTTGGATGCACACCCTCAACACCTTGGTTGTCGTGATGGAGATGAATACTTCAAGTCAGATAAAACCAATCTTAACGTCCTAATTGGGGCTGTTGTTGGAGGACCTGCAGAAGATGATTCCTTTCAGGATTCCCGTTTAAATGTTGCCCAGTCAGAGCCAACCACATACATCAATGCTCCTTTTGTTGGTGTTTTGGCTTACTTCAACAAACCTACTGTTACTGTTAGTTAG 1335 0.4322 MESAETHRAKEERGKRVAMSKVSCIVRMITMIVVMVMVTVTKAASMNYAEALGKSILFFEGQRSGKLPPSQRMKWRKDSALSDGSDIQVNKLSMDLVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGDSMGSELKNALDAIRWGTDYFIKATKFPDKVVAVVGDPVKDHNCWERPEDMDTPRTSYYVTQNKPGSEVSAEIAAALAASSIAFRSTDASYSNFLLNRAIQVFDFANKYRGSYNLSVGEGACPFYCDYSGYVDELIWGAAWLYKATETTSYWDFVKANIQSIDNNNFEFGWDCKNAGINVLVSQKIPCGQEVADPTLLINIAKSQADYILGKNPLGMSYMVGYGDKFPEKIHHRGSVVPSLDAHPQHLGCRDGDEYFKSDKTNLNVLIGAVVGGPAEDDSFQDSRLNVAQSEPTTYINAPFVGVLAYFNKPTVTVS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02969 444 PANTHER ENDO-1,4-BETA-GLUCANASE 29 311 - -
Spst2g02969 444 Gene3D - 320 443 IPR012341 GO:0005975
Spst2g02969 444 Pfam Glycosyl hydrolase family 9 48 313 IPR001701 GO:0004553|GO:0005975
Spst2g02969 444 Pfam Glycosyl hydrolase family 9 323 433 IPR001701 GO:0004553|GO:0005975
Spst2g02969 444 SUPERFAMILY Six-hairpin glycosidases 45 438 IPR008928 GO:0005975
Spst2g02969 444 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 336 362 IPR018221 -
Spst2g02969 444 Gene3D - 44 319 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02969 Spst-Chr2 29459586 29462750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02969 31 437 Glycoside Hydrolase AT1G23210 49.792 4.35e-157 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02969 K01179 - ming:122065348 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02969 2 29459586 29462750 Spst2g02969 2 29459586 29462750 ECH