Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02968 ATGGATTTGGTAGGTGGATATTATGATGCTGGTGACAATGTGAAATTCAATTTTCCTATGGCATTCACCACGACGATGCTAGCGTGGAGTGTGGTTGAGTTCGGAGATTCGATGGGTTCAGAGCTTAAAAATGCATTGGATGCAATTAGGTGGGGAGCTGATTATTTCATTAAAGCCACCAAATTTCCTGATAAGGTTGTCGCAGTAGTGGGCGATCCCGTTCAGGATCACGATTGTTGGGAGAGACCAGAAGACATGGACACTCCTCGAACCACGTACTATGTAACTCAAAACAAACCAGGTTCAGAAGTTTCTGCTGAGATTGCAGCAGCACTTGCAGCATCTTCCATTGCATTTAGGTCAACCGATGCTTCCTATTCCAACTTTCTTCTCAATAGGGCTATTCGGGTGTTTGACTTTGCAAATAAGTATCGGGGATCTTATAATCTCAGCGTAGGTGCGGGAGCATGTCCATTCTACTGTGATATTAGTGGTTACATGGATGAGTTGGTCTGGGGTGCAGCATGGTTGTATAAAGCCACAAGTAAAACCAGTTATTGGGATTTTGTAAAAGCAAATATTCATTCATTAGACTATAATATTTATCAATTTGGATGGGATAGCAAGAATGCTGGCATAAATGTGCTTGTTTCTCAGTGGGCGATGGGTGATTCAAGTAGCGCAAGTCTTTTCATTCCTAACGCAGATAGATTTATCTGTTCTCTGTCGCCAAATTCGCCAACCAAATCAGTCTCCTACACTAAAGGTGGTCTTCTCTTCAAACCTGGAATAGCTAATATACAAAACCCAACAGCTTTGTCATTTCTCTTAATTGTTTATGCACGCAACATGCATGCTGCGAAGAAAACAATACAATGTGAGAAAGAAGTTGTCGACCCGAATTGGCTTATAAAAATAGCAAAAAGTCAGGTGGATTACATATTGGGAAATAACCCACTAGGAATGTCATACATGGTGGGGTATGGAGGCAAGTTTCCAGAAAGAGTGCATCATCGTGGTTCAGTGATACCATCTTTGGATTCCATCCCACAGAAAGTGGGGTGTCGTAATGGAGATAAATACTTCAAAGAAAACAGGCCTAATATTAACGTGCTGACAGGGGCTCTTGTTGGAGGACCAGGACAAGATGATTCCTTTGTAGATTCCCGCTATAATCCTTCCCAAACAGAGCCAACCACATACATGAATGCTCCTTTTGTTGGTGTTTTGGCTTACTTCAACAAACCCACTATTACTGCTACTGTTATTTAG 1272 0.4182 MDLVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGDSMGSELKNALDAIRWGADYFIKATKFPDKVVAVVGDPVQDHDCWERPEDMDTPRTTYYVTQNKPGSEVSAEIAAALAASSIAFRSTDASYSNFLLNRAIRVFDFANKYRGSYNLSVGAGACPFYCDISGYMDELVWGAAWLYKATSKTSYWDFVKANIHSLDYNIYQFGWDSKNAGINVLVSQWAMGDSSSASLFIPNADRFICSLSPNSPTKSVSYTKGGLLFKPGIANIQNPTALSFLLIVYARNMHAAKKTIQCEKEVVDPNWLIKIAKSQVDYILGNNPLGMSYMVGYGGKFPERVHHRGSVIPSLDSIPQKVGCRNGDKYFKENRPNINVLTGALVGGPGQDDSFVDSRYNPSQTEPTTYMNAPFVGVLAYFNKPTITATVI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02968 423 PANTHER ENDO-1,4-BETA-GLUCANASE 2 414 - -
Spst2g02968 423 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 313 339 IPR018221 -
Spst2g02968 423 SUPERFAMILY Six-hairpin glycosidases 1 415 IPR008928 GO:0005975
Spst2g02968 423 Gene3D - 1 416 IPR012341 GO:0005975
Spst2g02968 423 FunFam Endoglucanase 1 418 - -
Spst2g02968 423 Pfam Glycosyl hydrolase family 9 1 410 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02968 Spst-Chr2 29446377 29448136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02968 1 414 Glycoside Hydrolase AT1G70710 55.396 2.80e-167 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02968 K01179 - gmx:100808442 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02968 2 29446377 29448136 Spst2g02968 2 29446377 29448136 ECH