Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02961 ATGGGTTTAAAGGAAAAGGGGAATGGAGATGGCGACAAAGAAATGAGGGGTACGAGGATGGAGAGGAACGGAAATGATGAGGGTAGATCTGGAATTTCCGCATGGGGTAACACCTTAGGGAATGAGTTAATGGAATTGGGATGTGATGAACGCTTGGCTCAATCTGAATTAGCTTCTGAAGTGTCGGCTGGAGACTTCGATTACAACCATGGTTTGATGGAGAATGCTTTTGCAAGCGCTTCTGCGATTACAGACCAGAGGCAAAAAATAGAGCAGTATAAGAGCATACTTGCTGCTGTCATTTCATCCAATGACATTGCTCAGGCTAGGAAATTCATCGATCACATGTTATCAGATGATGTTCCATTAGTAGTTTCGCGACAACTTTTGCAGACTTTTGCTCAAGAGTTGGGAAGATTGGAGCCTGAGATACAGAAAGAGATTGCTCATTACACGCTTGCCCAAATTCAGCCTCGCGTTGTGTCATTCGAAGAGCAGGTTTTAGTTATTAGAGAGAAACTTGCCGAGCTTTATGAATCTGAGAAGCAATGGTCGAAAGCAGCTCAAATGCTCAGTGGTATTGACCTAGATTCAGGAATGAGGGTGATTGATGATGCATTCAGGTTGTCAAAGTGTGTCCAAATTGCTTGTTTATACCTTGAGGACGATGATGCTGTCAATGCTGAAGCTTTTATTAATAAAGCATCATTCTTGGTCAGCAATAGTCCGCATGAAGTACTCAATTTAAAGTACAAGGTATGTTATGCAAGGATCTTAGATTTGAAGAGGAAGTTTTTGGAAGCAGCGTTACGGTATTATGATATATCTCAAATTGAGAAAAGGAAAATAGGAGACGAGGAGATTAATGAGGAAGCACTTGAACAAGCTTTATCTGCTGCTGTTACATGCACCATATTGGCAGCTGCAGGACCTCAGCGTTCCCGTGTTCTTGCCACTTTGTATAAGGATGAGCGTTGTTCAAAGTTGAAGATCTATCCAATATTGCAGAAGGTGTATTTGGAGAGAATTCTAAGAAAACCAGAAATTGATGCTTTTGCAGAAGAATTGAAACCACATCAGAAAGCTCTTCTTCCAGACAATTTCACGGTGCTGGACCGTGCTATGATTGAGCATAATCTTCTTAGTGCAAGCAAACTTTATACTAATATCAGCTTTGATGAGCTAGGCACGCTGTTGGGAATCCCCCCTCACAAGGCTGAGAAGATAGCATCAAGAATGATTTACGAGGATAGGATGAGGGGATCTATCGATCAGGTTGAAGCAGTCATACATTTTGATGACGACACTGAAGAGTTGCAAAGATGGGACCAGCAGATTGTAGGTCTATGTCAAGCCCTCAACGATGTTTTGGATAGCATGGCCAAGAAGGGCTTTCCAGTTCCTGTTTAA 1410 0.4213 MGLKEKGNGDGDKEMRGTRMERNGNDEGRSGISAWGNTLGNELMELGCDERLAQSELASEVSAGDFDYNHGLMENAFASASAITDQRQKIEQYKSILAAVISSNDIAQARKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPEIQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSPHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRKIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKGFPVPV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02961 469 MobiDBLite consensus disorder prediction 1 26 - -
Spst2g02961 469 ProSiteProfiles PCI domain profile. 264 437 IPR000717 -
Spst2g02961 469 SUPERFAMILY "Winged helix" DNA-binding domain 364 438 IPR036390 -
Spst2g02961 469 Gene3D - 363 441 IPR036388 -
Spst2g02961 469 MobiDBLite consensus disorder prediction 1 32 - -
Spst2g02961 469 FunFam COP9 signalosome complex subunit 4 361 441 - -
Spst2g02961 469 Pfam PCI domain 340 433 IPR000717 -
Spst2g02961 469 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 366 449 IPR000717 -
Spst2g02961 469 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 75 463 IPR040134 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02961 K12178 - gmx:100819593 755.747