Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02956 ATGGATCCAGATCAGAGCTCCAGAAGAACGAGGAAGCACAAGTACACTCCCCGGCCGCCCAAACCCCAAGCTCCCAAATCATGCAGAGAAGCGGACGATAAACAAGACGAAGATTGCACACCAGCTCGACTTCTGTCTCGTCGATACGAGAATCATGCAAGACGCGAGATTAAAGTCGAAAGAAAATCTAGCGTGGAAGTTGCATTTAGTCCTGGGATTTCATCAACCTCCCTCAGGACATTTGGCACAAGCAAAGCTATAGATGGTACCACAAACAGTGGCTCGCCATCTAAATATTTGGGTAAAGAGCAAATTCGTTCAAGACGTTCTTCTGCTGCTACTGAGGATCAAAATGATACCAGCACGATAGATGTTACTGAGGATACCACCAATGCATCAGCCAGGAAAATCAAAGGAAAGTACAAGGAACCATGGGATTATAACAACTCTTGTTATCCCATTACTCTTCCTCTAAGGAAGCCAAATTCTGGAAATCCAGAAATTCTTGATGAGGAAGAATTTGGGGAAGCTGCTAGTTCTGAGTATGATGAGAATACTGTTAATTCTGCTGCAGAACTCGAGCTCTTGGAGCAGAGTGAGCAACCAAAGATGTTTCTGTTCCAGCTTCCTAAATATATGCCTTTTAACGAGAAGAGTAATAAGGGGAAGGAGGAAATTGGTGCATCAACAGTATCGGGAAAGGCTGGTGCTTTAGAAGAGTTGCCAAGGGGATATATGGGCAAAATGCAGGTGTACAAGAGTGGAGCCGTCAAACTGAAATTGGGAGAAACTGTGTTCGATGTGTCTCCAGGTACAGATTGTAAATTTGCTCAAGATGTTGTAGCTGTGAACAATGCACAGAAAAATATCTGCAATCTTGGAGAGATTAGCAAAAAGGTTGTTATAGTTCCTGATCTTGATTCAATTGATCTGACAAATACTCAAAGGCAAAAATAA 957 0.4284 MDPDQSSRRTRKHKYTPRPPKPQAPKSCREADDKQDEDCTPARLLSRRYENHARREIKVERKSSVEVAFSPGISSTSLRTFGTSKAIDGTTNSGSPSKYLGKEQIRSRRSSAATEDQNDTSTIDVTEDTTNASARKIKGKYKEPWDYNNSCYPITLPLRKPNSGNPEILDEEEFGEAASSEYDENTVNSAAELELLEQSEQPKMFLFQLPKYMPFNEKSNKGKEEIGASTVSGKAGALEELPRGYMGKMQVYKSGAVKLKLGETVFDVSPGTDCKFAQDVVAVNNAQKNICNLGEISKKVVIVPDLDSIDLTNTQRQK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02956 318 PANTHER DNA-DIRECTED RNA POLYMERASE III 1 309 IPR007811 GO:0003677|GO:0005666|GO:0006383
Spst2g02956 318 Pfam RNA polymerase III RPC4 219 305 IPR007811 GO:0003677|GO:0005666|GO:0006383
Spst2g02956 318 MobiDBLite consensus disorder prediction 72 100 - -
Spst2g02956 318 MobiDBLite consensus disorder prediction 1 54 - -
Spst2g02956 318 MobiDBLite consensus disorder prediction 114 130 - -
Spst2g02956 318 MobiDBLite consensus disorder prediction 25 54 - -
Spst2g02956 318 MobiDBLite consensus disorder prediction 72 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02956 Spst-Chr2 29330050 29332468 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02956 K03026 - gmx:100817982 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02956 2 29330050 29332468 Spst2g02956 2 29330050 29332468 ECH