Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02954 ATGGCTCTCCTCACTTTCCCTCACTTGACTCATTTTCCGTCGCTTTCTTCCTTCCCAAACACCCGCTCTTTCTCTCGAACACGACGCTACTGCTCCATGAAATCAACCGGAACAGCCATTCTGTGGTTCAAGCACGATCTCCGAACCGATGACCACCCCGCGCTCCTTGCTGCCTCCACCTTTCCTTCACTCCTTCCTATTTACGTCTTCGATCACCGCATTATTTCCCGTTTCTCCGATGAGACGCTGGAGCTGCTTCTGCTTGCCTTGCAAGATTTGAGGAAGTCGCTTAAGGATCGCGGTTCCGATTTGATGATCCGTTTCGGCAATGCGGACAGCATCATACAGAAACTTGCAACGGAGGTCAAAGCCACTTGTGTGTTCGCGGAACAAGAGGTGGAGTATGAGCTGCGCCTCATCATAGATTTGCTCAAACAGCGTTTGAAGTCCGTCACAGTTCCGCAAGGGAGTCCTACGATTGAATTATGGGAAACTCCATTTTATGATGTTAAGGATGTGCAAAATCTTCCTTCATCATATAATGAGTTTAAGAAACTTCGACTTCCTGTGACTACACCACTTCAGCCGTCAGAGTCGACATTACCTGGTGCAGAAATAGAACTGGACTGGGGTGTTCTCCCCTCGTATGATGATATAAAGGGATTTATGACCAGCAGCCATCGTAAATCAGGAGAGAATTGGAGTTCAATTAAGGAGGCCTCAGCTGAAACAGATTTACGTAGAAAAGTATTGAAGTCTGGCGATAGCATTGAAAGAAATTCTAGCTTTGGGCAAACACAGTCAAGGGAGCGTAGTGGATCTGTCTTTGTTACAAAAGAAGGAAATGTCGTAGGAGGTAGTACAAACAATGTACTGAATGCATTGGCTGCATATCTGAGATACTTGGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACATGAAAAAGTGCGTGCTTCTGAAAGTCGGAATGGAGCGTCATTTATTGGACTATTCGGTCCTGCCCTATCTCTCGGCATTATATCTAGAAGAAGAGTATATTATGAAGCCATCAAATATGAGCGAGAACGAAACGCAGGTTTCTTGTCACCCTTCGGATATTCAGCTGCCACAATTGCAGCAGCAGTTGATGCTGTGTGCTCAATGGAGTGGTATTGGCTTATGGCTTTGAGAAATCAGATAAACAATGACGGAGTATACTCAACACGGATATGGAAATGGAAAGGATTTCTTATCGAGTATACAGTTGCTGGTGAAGATGGTCCTGCGGTTCTTCTTGTGCATGGATTTGGTGCCTTTTGGGGGCATTACCGTGACAACATACATGGTTTAGCTGAATCTGGAAATCGAGTTTGGGCAATTACTATTTTAGGATTTGGCAAATCAGAAAAGCCAAATGTTGTATATAGTGAAGTTTTGTGGGCTGAGCTATTAAGAGATTTTATTGTTGATGTTGTGGGTGAACCAGTTCATATTGTCGGCAACTCAATTGGCGGTTATCTTGTTGCTATTGTTGCTGGTATTTGGAGTGATTTGATCAAATCCCTTGTTTTGATCAACAGTGCGGGCAATGTCATCCCAAGTTATTCATTCATTCCATTGTCTAGAATTCAGGATAGGCAAACTTCCGGGGCTTCCTGGTTGGGTTCCCGCATTCTTCTATTCTACTTGAGGCTAAGAACTCAAGAGTTACTTAAGAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGATCGGCTCATAAATGAAATACTAAGAGCATCATATGATCCTGGTGTGCTTGCTGTGTTGGAAAGCATATTTAGCTTTAATCTTTCCATACCAGTCAACTTTCTTCTTGAAGATATCAAGGAAAAGGTCCTAATTATACAGGGGATGAAAGATCCAATTTCTGACTCCAATTCCAAAGTGGCTATGCTTAAAGAACATTGTGATGGAGTCATAATTAAGGAGTTAGATGCTGGTCATTGTCCGCACGACGAGGTGCCAGAACGAGTGAATACTATCATTTGTGAATGGATAGTTGGTGCAGAAAGTAACATTTTGGTAGACTGTCCGGTGTAA 2064 0.4351 MALLTFPHLTHFPSLSSFPNTRSFSRTRRYCSMKSTGTAILWFKHDLRTDDHPALLAASTFPSLLPIYVFDHRIISRFSDETLELLLLALQDLRKSLKDRGSDLMIRFGNADSIIQKLATEVKATCVFAEQEVEYELRLIIDLLKQRLKSVTVPQGSPTIELWETPFYDVKDVQNLPSSYNEFKKLRLPVTTPLQPSESTLPGAEIELDWGVLPSYDDIKGFMTSSHRKSGENWSSIKEASAETDLRRKVLKSGDSIERNSSFGQTQSRERSGSVFVTKEGNVVGGSTNNVLNALAAYLRYLEGTARDDWQEVHEKVRASESRNGASFIGLFGPALSLGIISRRRVYYEAIKYERERNAGFLSPFGYSAATIAAAVDAVCSMEWYWLMALRNQINNDGVYSTRIWKWKGFLIEYTVAGEDGPAVLLVHGFGAFWGHYRDNIHGLAESGNRVWAITILGFGKSEKPNVVYSEVLWAELLRDFIVDVVGEPVHIVGNSIGGYLVAIVAGIWSDLIKSLVLINSAGNVIPSYSFIPLSRIQDRQTSGASWLGSRILLFYLRLRTQELLKKCYPTRVERADDRLINEILRASYDPGVLAVLESIFSFNLSIPVNFLLEDIKEKVLIIQGMKDPISDSNSKVAMLKEHCDGVIIKELDAGHCPHDEVPERVNTIICEWIVGAESNILVDCPV 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02954 687 PANTHER DNA PHOTOLYASE 28 681 - -
Spst2g02954 687 Pfam DNA photolyase 40 185 IPR006050 -
Spst2g02954 687 Pfam Alpha/beta hydrolase family 424 667 IPR000073 -
Spst2g02954 687 Gene3D HUPs 20 189 IPR014729 -
Spst2g02954 687 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 37 170 IPR006050 -
Spst2g02954 687 SUPERFAMILY alpha/beta-Hydrolases 400 674 IPR029058 -
Spst2g02954 687 Gene3D alpha/beta hydrolase 399 674 IPR029058 -
Spst2g02954 687 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 37 198 IPR036155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02954 Spst-Chr2 29321110 29325574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02954 420 538 Acyl Lipid Metabolism Gene Families AT2G26740 30.159 6.09e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02954 - - gmx:100813721 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02954 2 29321110 29325574 Spst2g02954 2 29321110 29325574 ECH