Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02935 ATGGGATTTGATAATGAGTGCATAGTGAACATTCAAACTCTTGCTGGAGAGTACTTCTGTCCTGTGTGTCGGCTGCTTGTATTTCCAAACGAAGCTTTGCAGTCACAATGTACTCATTTATACTGCAAGCCATGTCTGACATACGTTGTGAGCACTACAAAGGCATGCCCATATGATGGTTACTTGGTCACCGAGGCAGATTCCAAGCCTCTGACAGAGTCGAATAAGGCACTTGCTGAAACTATTGGAAAAATAGCAGTTCATTGCCTTTATCATAGGAGTGGATGCACATGGCAGGGAAATTTGTCTGAGTGCACATCTCATTGTTCTGCATGTGCTTTTGGAAATTCTCCTGTTGTTTGCAATAGGTGTGGGATCCAAATAGTGCATCGCCAAGTACAAGAACATGCACAAAATTGTCCTGGTGTGCAAGGGCAGGTACAGCAGGTGACCACTACCCAGGATCCTTCAACTACTAGTGTTGTTGCTTCTGCGGATCAGAACCAGAATGCTGCTCCCATTGCAGCAACGGCTTCACAAGCTGCTGTCACAACTACTATGCCTGGGCAGGTTTCAAATCAGCAACCCAACCCTGCTTCCCAAACACAAACTTTAGTTCAAACTGCTGGGCAACCAACGGCAGAACAATGGTATCAGCAGCAACAGTATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTATCAACATTACTACCCCTATCAACAGTCCTTGGTTCCACAGTACCAGCAGGCCTATGGTCAGCCTCAACCTCAGTCTCAATCACAGCCCCAGGCCCAGCTTCAACCTCAGCCCCAGCCACAGGCCCAACACCAATCACAGCAGCCTCAACTTCAACCACAACCTCAGGCACAAGGACTTTCTCAACCACCTTCACATATTCAGGCTCCTGTAGCCCCACCATCTCAGAATCAGATGCAAGTTCAACAACAACCACAGCAACTTCAACCTGCTGTGCAGCCACATGGTCAGACGAGTCATGCTCCTGGCCATGGTCAACCCCTCCCTCAATCTCAGGCTCAGCCTTATCCTTACCCCCAAGTTCAGTCTCATTCTGTCCAACCTCAACCCCAACAGCCTATGCAAATGCCTCCATATCAGCAGACCCTTCCTCAAATGCAGCATTCACAACCTCAAATTCAACAACCAGTTCAGAAATATCCTGTTCCTCAATCTCAAGTTCATGCACAACTGCAACCCAATGCTTCAGTTCAACATATCTCTCAGCCCCCAATGCCTCATCACCATCCTGTGACACCTAATGTCCAGCCTCAAGTGCAAAATGCAACATCACATTCAGTGACAGGGCATCACTCTTATCCGCAACCTCTTCCTCACCCAAATATGCAACAGGGAGCTCCTCAACATAATATGCAGTTGCACCCTCAAAGTGGGCCCCAACCTCAGGCCCAACACCCTGTCCCGATGCAGAATCAGTTTCCTCCACAAATTCCAAACATGCGTCCTAATCAATCTCATGCTATGTTTCCTAACCAGCAACCACCTGTTCAGGGCCAAACTACCCCTCCTCTGCAGCAACAGCCCTTGTATACCCATAATCAACAACATGGACAAATCAACCAACATCCTACTCTGCAACCTGTTCAACAAATACCTCAGCAGCAGCCATTTGCACAACATCAAATGCCTATGCCATCACATTTACGACCACTTGGTCCAGCACATTCATTTCCCAAGCATGTGTATTCACAGTCACAGGCTAATACTGCACTATCAAATAACATTCAGCACAGTCAATCTCAAAATGCTGGTGGAAGGCCTTTAGTTCCTAATCATGCAGGACGCCAACAGCCATTTGTACAATCTGCCAATACCATGCCAGTTAGACATGGGCAAAATGGTGCTGGCTACTTGCTTGATAATCAGAAATTGTTGGTTGGTACCAACCATCAAGTGCAGTTGCCTTCTGAATTGCAGTCCAGGGCACCAGAAACAATTGAAAGACATGGTGATGTCAGTGAACAACAAACTGACTCTGCCTCTGGTAAGCTGGGTAAAAATTTTAAAGATTTGGACACGGTGTCTGGATCAGCGAATGAGTTGAAATCTGAAAAATTTGAAGCAAATTTGAAACCAATAGAGGTTGGGAATAAACAAAGTAATGAAGATCCACACTCTATGAAGAATTCAGTCCTGAATGCCAATGTAGTAGATAATGGTGATCCTGTGAATAAGAATCTTGGGATGGGGGAGGCTGCTGAAAGCAATTGGAAGCCTTCAGTTAGTAATAAATCTGTTGCTGCAGTGCACGGGGTTCAAAGCGACAGTAAGGAGCATTCTGTCCAAGGCAATGAATTTCAAGAAGGACATCCACCAAAGATAGACACAAAACTCCCTGACTTAGAAACCGATAAATTACACAATGATGACAATCCTGCGCCATCTGACACTCAAAGCAATGGGAGTTTTGCTCAGCTGTCTCACTCAGCCACTTTCACAGATCAGAGTAAGCATCAACAACCAATGACTAATTATGGGCCTCCTTCTGCCCAGCAGAGATCTTCTGCAATGTTAGCATCACAATTGCCACACCCAACAGTTCCAAACCAGCCACTCTCTTCATTGCACTCTTCAGCTCTTGTCAGGAATCATGGATCTGCCCATGGTTCTCATACAGGACACTCCTTAACAGATAATTTTCCGCCAACCATGTTTAAGCAGCCACAAGATTCTGACATTACTCCTGGACGAGGCTTTCAATCTCAGCCTCTTGGACCCCCACAACCATTTAACCAAGTCCACGAGCCTCCTTTCCATGCTGGTGCATCAAATTTGTCTCGTCTTGGAGGGCCTCAATTTGGTGCACCACTTCCTGGAGATATGCGTGGTCGAATGGCAGCCAACTTACCACCACATGGTCCAGAAGGTTTTGGTTTGCATGATGAAAGGTTCAAACCTTTCCTTGTTTCAAATCAACAAAATATTGATAGAAGAGAGTATGATGATGATCTAAAGAAATTCTCTAGGGTGCCTTTGGATGCTGAGGCAATTTCTAAATTTGGAAATTACTCATTAAGTGCACATGAAGCTGGAAAGAGATCAGTTGGTATTCATGATGACATTGTTAAGAAATCAGGTTCTACGCATCATCCTGGTTATCTTGGACCAGGTTCTGGATATGGGAGACATCATATGGATGGTATGACTCCAAGAAGCCCTGTTAGTGAATATGCTGAGATGTCTTCTCGTAGATTGGGGGGGCACTCCGGTAGTCGTGTTGGTAAGTCAGGTATAGATGATTTTGATGGCAGAGTTGCACGTCGCTTCAGTGGTGAGTTCCATGATAGTCAGTTTCCTCCTTTGCCTAGCCATTTGCATAGAGATGAATTTGATGGTTTTGGTAACTTCCGAATGGGTGAACATCCAAGGAGTGGTGATTTCATTGGTCAAGATGAATTTGCTGGCCATTTTCGAAGGGGTGAACCTTTGGGCCCTCATAATTTTCCTAGACATTTACATCTCGGGGAACGTATTGGTTTTGGTCCTCATCCTGGTCATATGAGAGCAGTTGAACTTGGTGGTTTTCGTAGTTTTGAACCTTTTACAAAAGGCAACAGGCCAGGCCATCCACAACTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCTCTTCCTGGATTCCCTAATGATGCTGGATTTTTAACGGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGGCTTCCAGCATGGGGTGGTGCCGGATATGTAAAGTTGACTGTGAAACAGTAGAAGGTCTGGATTTGCATTCACAAACAAAGGAGCACCAGAAGATGGCTATGGATATGGTTAAAACAATCAAACAAAATGCGAAGAAACAGAAGTTAATACCCAGTGAACAACCCACAGTTGATGAGGGAAACAAGACACACAATACTGGTTTTGAGGGTCGTGGAAATAAGCATTGA 3966 0.4534 MGFDNECIVNIQTLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTKACPYDGYLVTEADSKPLTESNKALAETIGKIAVHCLYHRSGCTWQGNLSECTSHCSACAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQVQQVTTTQDPSTTSVVASADQNQNAAPIAATASQAAVTTTMPGQVSNQQPNPASQTQTLVQTAGQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSLVPQYQQAYGQPQPQSQSQPQAQLQPQPQPQAQHQSQQPQLQPQPQAQGLSQPPSHIQAPVAPPSQNQMQVQQQPQQLQPAVQPHGQTSHAPGHGQPLPQSQAQPYPYPQVQSHSVQPQPQQPMQMPPYQQTLPQMQHSQPQIQQPVQKYPVPQSQVHAQLQPNASVQHISQPPMPHHHPVTPNVQPQVQNATSHSVTGHHSYPQPLPHPNMQQGAPQHNMQLHPQSGPQPQAQHPVPMQNQFPPQIPNMRPNQSHAMFPNQQPPVQGQTTPPLQQQPLYTHNQQHGQINQHPTLQPVQQIPQQQPFAQHQMPMPSHLRPLGPAHSFPKHVYSQSQANTALSNNIQHSQSQNAGGRPLVPNHAGRQQPFVQSANTMPVRHGQNGAGYLLDNQKLLVGTNHQVQLPSELQSRAPETIERHGDVSEQQTDSASGKLGKNFKDLDTVSGSANELKSEKFEANLKPIEVGNKQSNEDPHSMKNSVLNANVVDNGDPVNKNLGMGEAAESNWKPSVSNKSVAAVHGVQSDSKEHSVQGNEFQEGHPPKIDTKLPDLETDKLHNDDNPAPSDTQSNGSFAQLSHSATFTDQSKHQQPMTNYGPPSAQQRSSAMLASQLPHPTVPNQPLSSLHSSALVRNHGSAHGSHTGHSLTDNFPPTMFKQPQDSDITPGRGFQSQPLGPPQPFNQVHEPPFHAGASNLSRLGGPQFGAPLPGDMRGRMAANLPPHGPEGFGLHDERFKPFLVSNQQNIDRREYDDDLKKFSRVPLDAEAISKFGNYSLSAHEAGKRSVGIHDDIVKKSGSTHHPGYLGPGSGYGRHHMDGMTPRSPVSEYAEMSSRRLGGHSGSRVGKSGIDDFDGRVARRFSGEFHDSQFPPLPSHLHRDEFDGFGNFRMGEHPRSGDFIGQDEFAGHFRRGEPLGPHNFPRHLHLGERIGFGPHPGHMRAVELGGFRSFEPFTKGNRPGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKASSMGWCRICKVDCETVEGLDLHSQTKEHQKMAMDMVKTIKQNAKKQKLIPSEQPTVDEGNKTHNTGFEGRGNKH 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02935 1321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 119 IPR013083 -
Spst2g02935 1321 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 909 947 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 789 810 - -
Spst2g02935 1321 SUPERFAMILY RING/U-box 13 73 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 1291 1309 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 432 490 - -
Spst2g02935 1321 CDD RING-HC 18 57 - -
Spst2g02935 1321 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1027 1320 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 186 208 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 755 779 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 1043 1098 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 811 855 - -
Spst2g02935 1321 SUPERFAMILY TRAF domain-like 84 141 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 255 369 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 594 613 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 255 490 - -
Spst2g02935 1321 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 1290 1321 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 734 855 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 377 420 - -
Spst2g02935 1321 MobiDBLite consensus disorder prediction 664 690 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02935 - - gsj:114380210 1930.61