Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02934 ATGGCATTTCACATAGCTTGTCCAATTACATGTCGTCGAATCTGTTTCTGCGCGCTAGGGTTTCCGCGCGCGCTTCATGACCCCGACGACGCCAATGGCTTCGCTCAAGACGTCGCCGCGCTCCGAGACTTCCTCGCCGACACGCGCAGGGACGACGCCACCGTACAGGTCCCCGTCCCCAAGGTTCTGCCTCCGCCTCCGCCGCCGCCTGACGGTCTTCCTCTCAACGCCGACGCGCTCGATGAGTCTGCCTCCATGAAGGCCAAGCGCATCGCGCTCCAGCGCAAGGGCGCCGCCGCAATGATAGCGGCCGAGGAGTACGCGCGCCGCTTTGAGTCCGGCGACGTGGTGAATACCCCAGGAAATGTTACCGGAGAGGAGCAGGGGCAAGCCAATAGGAGCTATTGTCGAATTTGCAAGTGCGGGGAAAATGAGGGAAGTGAGAAAGCTCAGAAGATGCTGTCATGCAAAAGTTGTAGTAAAAAGTACCACAGGAACTGCTTGAGAAGTTGGGGTCGAAATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCCTCTATGCCGAATTTGCGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGTGATGGTGCTTACCACTGTTATTGTTTGCAACCTCCTCACAAGAGTGTTTGTAATGGGCCCTATTTGTGCACGAAACACGCAAGGTGTCACAGTTGTGGATCAAATGTCCCTGGAAATGGACTAAGTGTGAGGTGGTTTATGGCATACACAAACTGTGATGCATGTGGAAGATTGTTCACAAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCTATGGTTTGTTGTGATACTTGCCAGCTCTGGGTTCATTGCCAATGTGATAATATCAGTGATGAAAAATATCACCATTTTCAAGTGGATGGGAATTTGCAATATAAATGTCCCACCTGTCGTGGTGAATGTTATCAGGTCAAGAATCCTGAAGATGCTGCACAAGAAATTTGGAGGAGACGGAATGTTGCTGAGAGAGATTTGATTGCTAGCTTGAGAGCTGCTGCTGGTTTGCCAACTCAAGAAGAGATATTTTCTATTTCACCATTTTCAGATGATGAGGATAGTGGGCCTTTGAAATTAAAGAGTGAATCTACCCGTTCCTTTAAGTTCTCTCTGAAGAATTTGTCCAATGACTCACCAAAGAAGAAATCTTCAAGCAAAAAGACTATGAAGAAAAAAGATTCCGAGTCATTTATGATTAGTAAAATCGACACACACAATAGTTTTGAAGGACATAGTGATATTAAATCTTTGCATAGCTTAGATGATGATAAGAATGATGATATACAATCCCAGAGAAATGATGGTCCAGATGTTCACTCATCACCTGCTACTGGAAGCTTGAGTCAGACTGAAGCATCTTGCCCTAGTAATCAACCAGGGATTTTGAAACATAAGTTTGTTGATGAGGTAATGGTCAGTGATGAAGAGAGGAAACCTAGAGTTGTTCGAATTAAAAACAACAAGGCACATATTATGGATAGTGAAGAGGAAAGTGGAAAACAGAGTGTTAAAACTCAGAATGTGAAAGGGAAGAAGTTGGTTATAAATTTGGGAGCACGGAAAATTAATGTGGCCAGCTCCCCACGTTCTGATACTTCAAGCTGCCAAAAAGATCAAGATCTGGTGACTATTAATGGAAATGAAGATATAAGCCAATGCAGGAAGGGAGACAAAATTGCATTAGATAGACAAGAAGGCACAGCTAGGCATATTGACGGTAAAGGAAATAGAGTTGATTCTGGTCAATCAAAAGTTTTCAAGGTTTCAGGAAGAGAAGGAAATTTGATTAAGCTGGGAAAAGTTAAGCCTGATGTTTCTGAATTGAACCTGGCCGCAGGTAGAGGCAATATGTCTGATGGGCGGATGAAACATAGTATTGATGAAATGATTGGTCATGTTGGAATGAAAGCTACATCAAGAGGTGAAAGGACGTATTTGGGGAAGCAATCGGAAGGTAGCTCTGATGCGAATGATGAGACAGATGACAATAATAATGGAACACCTTCGCATTCTTTGCCTAAAGATTCCAAACCTTTACTAAGATTTAAATTCAAGAAACCCAGCATTGAAACTCAAAATTCTCCTCATCGGGAGGAGGAGAAGATGACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTTAAAACATCATTTAATGAGTCTGAAGGTGTAAGTCAATCACATCAAGACAGTGGAATGGATGAGATCATGGATGCAAACTGGATTTTGATGAAATTGGGCAATGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCGGACAATTCTTGGCACAAGGGTGTGGTTACTGACGTAGTTGAAGGTACTTCGAAGTTATTTGTTGCATTAGACGATGGGAAAGTGAAGACCCTGGAACTCAGGAAACAGGGGGTCCGATTTGTTCCTCAAAAGCAGAAGAGATCCAAGACATGA 2532 0.4388 MAFHIACPITCRRICFCALGFPRALHDPDDANGFAQDVAALRDFLADTRRDDATVQVPVPKVLPPPPPPPDGLPLNADALDESASMKAKRIALQRKGAAAMIAAEEYARRFESGDVVNTPGNVTGEEQGQANRSYCRICKCGENEGSEKAQKMLSCKSCSKKYHRNCLRSWGRNRDLFHWSSWTCPLCRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLCTKHARCHSCGSNVPGNGLSVRWFMAYTNCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDTCQLWVHCQCDNISDEKYHHFQVDGNLQYKCPTCRGECYQVKNPEDAAQEIWRRRNVAERDLIASLRAAAGLPTQEEIFSISPFSDDEDSGPLKLKSESTRSFKFSLKNLSNDSPKKKSSSKKTMKKKDSESFMISKIDTHNSFEGHSDIKSLHSLDDDKNDDIQSQRNDGPDVHSSPATGSLSQTEASCPSNQPGILKHKFVDEVMVSDEERKPRVVRIKNNKAHIMDSEEESGKQSVKTQNVKGKKLVINLGARKINVASSPRSDTSSCQKDQDLVTINGNEDISQCRKGDKIALDRQEGTARHIDGKGNRVDSGQSKVFKVSGREGNLIKLGKVKPDVSELNLAAGRGNMSDGRMKHSIDEMIGHVGMKATSRGERTYLGKQSEGSSDANDETDDNNNGTPSHSLPKDSKPLLRFKFKKPSIETQNSPHREEEKMTIKGQRSKRKRPSPFKTSFNESEGVSQSHQDSGMDEIMDANWILMKLGNDAIGKRVEVHQTSDNSWHKGVVTDVVEGTSKLFVALDDGKVKTLELRKQGVRFVPQKQKRSKT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02934 843 ProSitePatterns RecR protein signature. 261 283 IPR015967 GO:0006281|GO:0006310|GO:0046872
Spst2g02934 843 MobiDBLite consensus disorder prediction 399 489 - -
Spst2g02934 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 189 IPR013083 -
Spst2g02934 843 ProSiteProfiles Zinc finger PHD-type profile. 271 330 IPR019787 -
Spst2g02934 843 FunFam PHD finger family protein 130 245 - -
Spst2g02934 843 MobiDBLite consensus disorder prediction 463 486 - -
Spst2g02934 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 240 IPR013083 -
Spst2g02934 843 PANTHER HL01030P-RELATED 118 416 - -
Spst2g02934 843 MobiDBLite consensus disorder prediction 748 763 - -
Spst2g02934 843 MobiDBLite consensus disorder prediction 705 735 - -
Spst2g02934 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 330 IPR013083 -
Spst2g02934 843 MobiDBLite consensus disorder prediction 666 763 - -
Spst2g02934 843 SUPERFAMILY FYVE/PHD zinc finger 270 329 IPR011011 -
Spst2g02934 843 ProSiteProfiles Zinc finger RING-type profile. 136 189 IPR001841 -
Spst2g02934 843 ProSitePatterns Zinc finger PHD-type signature. 136 188 IPR019786 -
Spst2g02934 843 MobiDBLite consensus disorder prediction 672 701 - -
Spst2g02934 843 ProSiteProfiles Zinc finger PHD-type profile. 133 191 IPR019787 -
Spst2g02934 843 SUPERFAMILY FYVE/PHD zinc finger 180 241 IPR011011 -
Spst2g02934 843 SUPERFAMILY FYVE/PHD zinc finger 127 189 IPR011011 -
Spst2g02934 843 MobiDBLite consensus disorder prediction 435 462 - -
Spst2g02934 843 SMART ring_2 274 327 IPR001841 -
Spst2g02934 843 SMART ring_2 136 188 IPR001841 -
Spst2g02934 843 SMART PHD_3 273 328 IPR001965 -
Spst2g02934 843 SMART PHD_3 190 236 IPR001965 -
Spst2g02934 843 SMART PHD_3 138 189 IPR001965 -
Spst2g02934 843 MobiDBLite consensus disorder prediction 408 428 - -
Spst2g02934 843 FunFam PHD finger family protein 268 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02934 Spst-Chr2 29064732 29071094 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02934 - - gmx:100815407 1521.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02934 2 29064732 29071094 Spst2g02934 2 29064732 29071094 ECH