Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02922 ATGGCTGTCACTTCCTTCTCCAACTTCTCTGCCTCCTCCTTCTCTCTCCCCCTCCGTTACCGCTCTTCTCTCCCGCTACCTTCCCTCACTCTCTCGTTCCGTCCCACACACTCTTCTTCCCATGCTTCCCTTTTCATACCTCTTCGCTCTCCCGTGTCCGCCATTTTTGCATCGGCCCACGGCGGCGGGACTGGAGGAGGGCATGGTGCAGGTCGTGGGGGAGGAAGTGGGGGTGGCGACGGTGAATCGGAAGACAGGGATCGCAACCGAGAGGAGGCGCTCCTCGTTCTCGCGGAGGCCGGGCGACCGTTGGAGAAATTGCCCGCGGATTTAGCGGCCGCTATTGAGGCGGGGCGAGTTCCGGGGTCGATTGTGAAGAGGTTCTTTGAGCTGGAAAAATCGGCCGTGTTCCGGTGGTTGCTGAATTTCGGAGGGTTTAAGGAGAGGTTGCTGGCGGATGATTTGTTCCTCGCCAAGGTTGGCATGGAGTGCGGTGTTGGCATCTTTACGAAGACTGCTGCGGAGTTGGAGAAGCGCAAAGAAAATTTTAGTAAGGAGCTTGATTTTGTTTGTGCCGATGTGGTAATGGCCATTGTAGCGGATTTTATGCTTGTGTGGCTTCCTGCTCCCACAGTTTCTCTCCGACCACCACTTGCTGTTAGTGCTGGAACTATTGCTAAATTCTTCTATGGCTGCCCTGAAAATGCTTTTCAGGTGGCTTTGGCTGGAACCTCATATACACTCATCCAGAGAATAGGTGCTATAGTGCGTAACGGTGCAAAGCTATTTGCAGTTGGGACTGGTGCATCACTGATTGGTACAGGTGTAACAAATGCGCTGATCAATGCGAGAAAAATTGTTGATAAATCTTTTGCCGCTGAGGCTGAGGATGTTCCGATAGTATCGACTAGTGTTGCCTATGGGGTTTACATGGCAGTATCTAGCAACTTAAGGTACCAAGTACTAGCTGGAGTTATTGAACAAAGGATTCTAGAACCTTTGCTACACCAGCACAAGCTTGTCCTGAGCGCAATTTGCTTTGCTGTCAGAACTGGAAACACTTTCTTGGGCTCACTATTGTGGGTGGATTATGCTCGCTGGGTTGGAGTCCAGAAGATTCGGGATTAG 1128 0.516 MAVTSFSNFSASSFSLPLRYRSSLPLPSLTLSFRPTHSSSHASLFIPLRSPVSAIFASAHGGGTGGGHGAGRGGGSGGGDGESEDRDRNREEALLVLAEAGRPLEKLPADLAAAIEAGRVPGSIVKRFFELEKSAVFRWLLNFGGFKERLLADDLFLAKVGMECGVGIFTKTAAELEKRKENFSKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYTLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALINARKIVDKSFAAEAEDVPIVSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLVLSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02922 375 MobiDBLite consensus disorder prediction 63 89 - -
Spst2g02922 375 Pfam Protein RETICULATA-related 148 325 IPR021825 -
Spst2g02922 375 Coils Coil 173 193 - -
Spst2g02922 375 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 38 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02922 Spst-Chr2 28984866 28987876 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02922 - - gmx:100818590 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02922 2 28984866 28987876 Spst2g02922 2 28984866 28987876 ECH