Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02921 ATGGCTTCATGTACCACACCTCCTTCGCTCATGCTCGCTCACCCTCAAGACCTCTCTTCTTCTCTGCGCTTCTTCTCTCACTGTCACAGGCCAACCTTCTCTCTATGCTCTCTCGTCTCCAAGCCCTCTTCCAACTGGGTCCAGCTCAGCTTCCGAAGAGACCCCAAATCCAGGACCTGCCATGCCGTCGTCGCCGCTTTGGCTGCCGAGGTTGAAGTGACCGAAACTGTCGACGACACGGCGGATGGACTGGACGAGTCTGCCGCCACCGACACTGTCACCACCCCCAAGCCTAAGAAAGGCAAGGCTGCATTGCCTCTCAAGAGGGATAGGACAAGGTCTAAGAGGTTCTTGGAAATTCAAAAATTGAGGGAGCGTAAACAAGAGTATGATTTGAAGACAGCAATATCTTTGGTTAAAGAAACAGCTAAAACCAAGTTTGTTGAAACAGTAGAAGCCCATTTCCGCCTCAACATTGACCCTAAATATAACGATCAACAATTAAGAGCAACAGTAAATCTGCCTAAGGGAACTGGAAAACCGGTTAAAGTGGCTGTTCTCACTCAAGGTGAAAAATTCGATGAAGCAAAAAATGCTGGAGCTGATTTGGTAGGTGGAGAAGACTTGATAGAACAGATAAAAGGAGGATTCATGGAGTTTGATAAACTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTATACTAGGGAAGATTCTGGGACCAAGAGGACTGATGCCAAACCCAAAAGCTGGCACTGTAACACCTAATATTCCTCAGGCTATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGGGCAGACAAAACTGGAATCGTGCACTTACCTTTTGGAAAAGCCGACTTTTCAGAAGAGGATCTACTTGTAAACTTGCTTGCTGCTGTGAAATCAGTAGAGGCAAATAAACCTTCGGGTGCTAAAGTCGGCTGTCCCGGGTGCCATTTAGGAGAGGTGATATCTGCGGGTAAATGGTCTGCATACAGTGTGAAGCATGTTTATGTTGCCATCAATCTTAAGTTTGGAGGTATTGCAACATTGCTGCATTGCCATGTGGGAGTTATGGGCTGTTCTCAGGATGGTAATTGTTACAGGGGTACTTTGTGCTGTCAGCTAATTCTATTTATCATCTGGCTTCCTACTTTTAAAGATGCGACAGCACAGGAAGTTCATGCTAACCATAGAAAAATGTCTTCTCTGGTAGAGTTAGCTAAGGAACCTGCTTCGGGTGAATCCGGACTCTTTGACCCCATAGAAATATCACCTTCTGTATTACCAAAATTCCCATACCCCACTGAGTCTTTGCCACCAATGTACCCTACTTTCCCAACCAGATATGAACCAATTTTAACTGGAAAATGTCCTGTGAACTTTTCCCATTCAGATATATCAAACATACTAGATAAAACAGCATCTGATTGTTCTGGACCTTTGGCAGCCCTTGTAGGAAATGTAATATGTTGTCCTCAGTTTAGTAGCTTGATCCACATCTTCCAGGGTTTCTACACCATGAAGTCTGATAATTTGGTTTTACCAAATTCAGTTGCCAATCATTGTTTTTCTGATATCATTAGTATTCTAGCCAGTAGAGGGGCAAATAGTACGATCCCCACACTATGCTCCATAAAATCATCTAATTTTACAGGTGGGTCATGTCCAGTGAAGGATGATGTTACACTTGAAAAAACAGTCAATACAAGTAAGTTACTTGAGGCATGCAGCACTGTTGATCCACTTAAAGAATGTTGCAGACCTGTTTGCCAGCCTGCGATAATGGATGCAGCACTACAGATTTCTGGAAGACAGATGACGAGTAACAATAATGAAAATATGGCTGGAGAAGTGAATCACACTGATTATCTTAATGATTGTAAAAGTGTGGTTTATTCATATCTTTCAAAAAAGCTATCATTTGAGGCTGCAAATACTGCATTCCGAATACTGTCTGCATGCAAAGTCAATAAAGTTTGTCCTTTGACTTTTACGGAGCCTGCAGAAGTAATCAATGCATGTCAGAACATAGCTGCCCCAAGTCCTTCCTGTTGTAGTTCATTAAACACGTATATCGCGGGGATACAAAAACAAATGTTAATTACAAATAAACAAGCTATAATATGTGCAACACTTTTTGGATCTTTGTTGCGTGGAGGTGGAGTGATGACAAATATTTATGAGCTTTGTGATGTTGATTTAAAAGATTTCAGCATACAAGCTTATGGACAACAAGGATGTTTACTTCGGAGTTTGCCTGGAGATGTGATATTTGACAATTCATCCGGCTTTAGCTTTACATGTGATTTGAGTGACAACATTGCTGCGCCCTGGCCATCATCATCTTCAATTACATCTTTGTCACTCTGTGCGCCTGAGATGTCATTACCAGCTCTCCCGACTTCACAAACATTAAAAAATAGTGGTTGTAATTCCGGTGGAGTTGGATTGCTTGTGGTTATTTTTTCATTTTTCATCTTCAGTACGCTAAATCCCCCTTTTCCTCCCCATTTCCACGGACTGACTAACACTGATTCGGAAAAAGGGAAATGGAAAATGCTGACTTAG 2577 0.4234 MASCTTPPSLMLAHPQDLSSSLRFFSHCHRPTFSLCSLVSKPSSNWVQLSFRRDPKSRTCHAVVAALAAEVEVTETVDDTADGLDESAATDTVTTPKPKKGKAALPLKRDRTRSKRFLEIQKLRERKQEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAVKSVEANKPSGAKVGCPGCHLGEVISAGKWSAYSVKHVYVAINLKFGGIATLLHCHVGVMGCSQDGNCYRGTLCCQLILFIIWLPTFKDATAQEVHANHRKMSSLVELAKEPASGESGLFDPIEISPSVLPKFPYPTESLPPMYPTFPTRYEPILTGKCPVNFSHSDISNILDKTASDCSGPLAALVGNVICCPQFSSLIHIFQGFYTMKSDNLVLPNSVANHCFSDIISILASRGANSTIPTLCSIKSSNFTGGSCPVKDDVTLEKTVNTSKLLEACSTVDPLKECCRPVCQPAIMDAALQISGRQMTSNNNENMAGEVNHTDYLNDCKSVVYSYLSKKLSFEAANTAFRILSACKVNKVCPLTFTEPAEVINACQNIAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICATLFGSLLRGGGVMTNIYELCDVDLKDFSIQAYGQQGCLLRSLPGDVIFDNSSGFSFTCDLSDNIAAPWPSSSSITSLSLCAPEMSLPALPTSQTLKNSGCNSGGVGLLVVIFSFFIFSTLNPPFPPHFHGLTNTDSEKGKWKMLT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02921 858 Gene3D - 177 268 IPR016095 -
Spst2g02921 858 Gene3D - 130 314 - -
Spst2g02921 858 MobiDBLite consensus disorder prediction 80 104 - -
Spst2g02921 858 Hamap 50S ribosomal protein L1 [rplA]. 108 346 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Spst2g02921 858 Pfam Ribosomal protein L1p/L10e family 140 313 IPR028364 -
Spst2g02921 858 ProSitePatterns Ribosomal protein L1 signature. 230 248 IPR023673 -
Spst2g02921 858 SUPERFAMILY Ribosomal protein L1 116 314 IPR023674 -
Spst2g02921 858 Pfam SPARK 457 613 IPR043891 -
Spst2g02921 858 PANTHER GPI-ANCHORED PROTEIN 366 827 IPR040336 -
Spst2g02921 858 FunFam 50S ribosomal protein L1 177 268 - -
Spst2g02921 858 CDD Ribosomal_L1 132 311 IPR028364 -
Spst2g02921 858 NCBIfam 50S ribosomal protein L1 113 314 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02921 Spst-Chr2 28960636 28972600 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02921 - - gmx:100809087 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02921 2 28960636 28972600 Spst2g02921 2 28960636 28972600 ECH