Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02920 ATGGCGAATGCTTTGAGAGTTGGTTGTGCTCTCTCACTCTGCTCCTTACGGAACACCAGACCCCATCTTCCCCTTCTCTCCAACTCCACGCGATTACGTTCCAAGTTCCCGTTTTTCACCCTCTCATCGTCGCCAAACACATTTGGATCTCCTTCATTTCGCAGGCTCTCTTCTTCTTCAATTGACGAAGCAGTAACCAACGAAGCCATCACAGGGAATGCAAGTGGTGAAGCTGAGAGCAGTATTAGGGACGCGGCGGGGCTACTTGACATAAGGGTTGGACTCATTCTGAGGGCATGGAAACACGATGAGGCTGATTCTCTGTATGTGGAAGAGGTTGATATTGGTGAGCCTGAACCCAGAATCATATGCAGTGGCCTTGTCAACTACATCCCTATTGAACACCTTCAGGGAAAAAAGGTTATTGTCCTGTCCAACCTGAAGCCGAGAAATATGCGTGGTGTCAAGTCCTGCGGAATGCTGATGGCTGCTTCTGATGCAAAGCATGAGAATGTTGAACTTCTGTTTCCTCCCGAGGAAGCAAGTCCAGGTGAAAGAATATGGTTTGGAATGGAAGATGAAAAGGATGATCAACCTGTAGCGGCAACTCCGAATCAGATACAAAAGAAAAAGATATGGGAATTGGTGCAACCTCATCTAAAGACAGATGTTTCTTGTATTGCGATGCTAGGGGAGCATGTCATGCGTACATCTGTAGGTTCAGTAACATGCCGGTCCTTGCGGAATGCAAATATCTCCTGA 762 0.4724 MANALRVGCALSLCSLRNTRPHLPLLSNSTRLRSKFPFFTLSSSPNTFGSPSFRRLSSSSIDEAVTNEAITGNASGEAESSIRDAAGLLDIRVGLILRAWKHDEADSLYVEEVDIGEPEPRIICSGLVNYIPIEHLQGKKVIVLSNLKPRNMRGVKSCGMLMAASDAKHENVELLFPPEEASPGERIWFGMEDEKDDQPVAATPNQIQKKKIWELVQPHLKTDVSCIAMLGEHVMRTSVGSVTCRSLRNANIS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02920 253 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 79 252 - -
Spst2g02920 253 FunFam tyrosine--tRNA ligase, cytoplasmic 85 253 - -
Spst2g02920 253 SUPERFAMILY Nucleic acid-binding proteins 85 252 IPR012340 -
Spst2g02920 253 CDD tRNA_bind_EMAP-II_like 88 188 - -
Spst2g02920 253 Gene3D - 85 253 IPR012340 -
Spst2g02920 253 Pfam Putative tRNA binding domain 91 186 IPR002547 GO:0000049
Spst2g02920 253 ProSiteProfiles tRNA-binding domain profile. 85 188 IPR002547 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02920 Spst-Chr2 28955908 28959144 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02920 - - var:108338794 464.536