LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst2g02900	ATGGTGAGAAAAATTAGCTCAAATGCTGTTATGGAGCTTCTTGAGGCCTCACATTTAGGATTGAAAGGAGAAAAGGTATTCGATGAGACCAAAACTTGTGCCATTAATTTTCTGAAGGACACTATGCGGATGGAAAGTCCTATCAACGTGGACCAACCATCGAATCTAGCTGTTGAAAGAATAGTCCATTCCTTGGAGCTGCCGTCCCATTGGAGAGTACCGTGGTTCGATGTCAAATGGTACGTGGAGCAGTACAAACACGAGAAAAATATGAACGTTCATTTACTTGAACTATCCAAATTGAATTTCAACATGATTCAGGCCACACTTCAGTTGGAGATCAAGGAATTATCCAGGTGGTGGGAGAAGCTTGGCATTAAAGAGTTGAGCTTTGCAAGGAACAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCCAAGTACAAATCCATCAGAAAATGGCTCACTAAAGTTATTGTTCTGGTACTAGTCATCGATGATGTTTATGATATTCATGCCTCATTTGAAGAGTTGAAGCCCTTCACAAAGGCGTTTGAGAGATGGGGCGACACAGAACTTGAAGAACTTCCAAGGTACATGAGAACATGCGTCCATGCACTTCAAAATGTCACAAACGAAATCGCTTATGAAATTGGCGGAGAAAATAGCTTCCACCTGGTATTACCTTACCTAAAGAAAACGTGGATAGACTTTTGCAAAGCATTATACGTGGAAGCAAAGTGGTACAGCAAGGGATACATTCCATCGTTGGAAGAATATCTAAGCAATGCTTGGATTTCATCTTCGGGTCCAGTAATTTTACTCCATTCATATCTTGGTACAGTGTATCAAGTAACGGATTCAATGGATGATTTTCTACACACGTACGAAGATTTGGTCTACAATGTATCTCTTGTGATTAGACTATGCAACGATTTAGGGACGACAGTGGCTGAAAGAGAAAGGGGTGATGCAGCTTCGTCGATCGTATGCTATATGAATGAAAAGGGTGTTTCAGAGGATAAAGCAAGAAAGCATATCGAAGAGAGAATCATTGAAGCATGGAAGAAGATAAATGACAAGTGTTTTGGTTCTTGTGGTTGCTGGATGGAGCCATTTCTTACTCAAGCTACAAACGCAGCTCGTGTGGCCCATACACTTTATCAAAATGGCGATGGTTTTGGAATACAAGACCGTGACATCAAAAACCATATCTTATCACTACTTGTAGAACCCCTTTAA	1254	0.4107	MVRKISSNAVMELLEASHLGLKGEKVFDETKTCAINFLKDTMRMESPINVDQPSNLAVERIVHSLELPSHWRVPWFDVKWYVEQYKHEKNMNVHLLELSKLNFNMIQATLQLEIKELSRWWEKLGIKELSFARNRLVESFMCAAGVAFEPKYKSIRKWLTKVIVLVLVIDDVYDIHASFEELKPFTKAFERWGDTELEELPRYMRTCVHALQNVTNEIAYEIGGENSFHLVLPYLKKTWIDFCKALYVEAKWYSKGYIPSLEEYLSNAWISSSGPVILLHSYLGTVYQVTDSMDDFLHTYEDLVYNVSLVIRLCNDLGTTVAERERGDAASSIVCYMNEKGVSEDKARKHIEERIIEAWKKINDKCFGSCGCWMEPFLTQATNAARVAHTLYQNGDGFGIQDRDIKNHILSLLVEPL	417

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst2g02900	417	SUPERFAMILY	Terpenoid synthases	91	417	IPR008949	-
	Spst2g02900	417	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	9	90	IPR008930	-
	Spst2g02900	417	Gene3D	-	4	105	IPR036965	GO:0010333\|GO:0016829
	Spst2g02900	417	FunFam	Isoprene synthase, chloroplastic	77	407	-	-
	Spst2g02900	417	SFLD	Isoprenoid Synthase Type I	91	416	-	-
	Spst2g02900	417	SFLD	Terpene Cyclase Like 1 C Terminal Domain	91	416	IPR034741	-
	Spst2g02900	417	Gene3D	Farnesyl Diphosphate Synthase	106	417	IPR008949	-
	Spst2g02900	417	PANTHER	OS04G0344100 PROTEIN-RELATED	9	397	-	-
	Spst2g02900	417	Pfam	Terpene synthase family, metal binding domain	96	361	IPR005630	GO:0000287\|GO:0010333\|GO:0016829

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst2g02900	Spst-Chr2	28804113	28805738	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst2g02900	K14173		-	gmx:100812119	624.78