Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02853 ATGGCTGGTCAAATTAGCTTTTGGGTTTGGGTACAGAACCATACCCAAAAACAAAACTGGAAGACCCAATTACACTCGAACCGTACACGTGTGATTTTCTGTGGGACCATCCGTACCTGTACTTTTGTACATGTACCCTATGTGACAAAAATGCACGCCTCCCAAGATGCTAATGACATGGATCATGTGCTTTCCACCACCCTTTACTTTCATTTCAAGAACAACTCGCTACACAGTGGAAGGATTCCTCTTCAACCCTTTGTCTACAAGATGAATTTCAAAAACGTGAATGTACCTAAGGTTCCTGGGGGCGGAATCGCTGCTTTGCTCAAAGTTGGCATTATTGGCGGGCTTGCTGTTTATGGGGCTGCAAACAGCTTGTACAATGTCGAGGGAGGTCATCGAGCCATTGTATTCAATCGCATTGTTGGTGTCAAAGATAAGGTGTATCCTGAAGGGACACATGTTATGGTTCCTTGGTTCGAGAGGCCTGTGATCTATGACGTACGTGCACGACCTCATTTAGTAGAGAGTACTTCAGGGAGCCGTGATCTCCAAATGGTGAAAATTGGGCTTAGAGTCCTTACCCGACCTCTTCCAGACCAATTACCGACAATTTATCGAACCCTGGGTGAAAATTATAATGAAAGGGTGCTGCCTTCTATTATTCATGAAACTCTCAAAGCTGTGGTTGCACAGTATAATGCCAGTCAGCTCATTACTCAGAGAGAGACTGTTAGTCGAGAAATAAGGAAGATATTGACTGAGAGGGCCTCCCATTTTAACATTGCTTTGGATGATGTGTCAATCACTAGTTTGTCATTTGGGAAGGAATTTACAGCTGCCATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCTGAGAGGGCTAAATTTGTTGTAGAAAAAGCCGAACAAGACAAAAGAAGTGCTGTTATTAGAGCCCAGGGTGAAGCCAAGAGTGCCCAGTTGATTGGTCAAGCTATAGCCAACAATCCTGCATTTATCACCTTAAGGAAAATTGAAGCTGCAAGGGAAATTGCTCAAACGATTGCAAATTCTGCCAACAAGGTTTACTTGAATTCTGACGATCTCTTACTCAATCTCCAGGAGTTCAATTTGGAGCCCAGTGGGAAGAGATAG 1140 0.4395 MAGQISFWVWVQNHTQKQNWKTQLHSNRTRVIFCGTIRTCTFVHVPYVTKMHASQDANDMDHVLSTTLYFHFKNNSLHSGRIPLQPFVYKMNFKNVNVPKVPGGGIAALLKVGIIGGLAVYGAANSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHVMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERASHFNIALDDVSITSLSFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTIANSANKVYLNSDDLLLNLQEFNLEPSGKR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02853 379 FunFam Prohibitin 2 155 289 - -
Spst2g02853 379 Coils Coil 286 306 - -
Spst2g02853 379 SUPERFAMILY Band 7/SPFH domain 158 294 IPR036013 -
Spst2g02853 379 PANTHER PROHIBITIN 91 374 IPR000163 GO:0016020
Spst2g02853 379 Gene3D Band 7 domain 157 289 IPR036013 -
Spst2g02853 379 Pfam SPFH domain / Band 7 family 129 304 IPR001107 -
Spst2g02853 379 CDD SPFH_prohibitin 127 321 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 170 186 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 234 250 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 305 321 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 211 229 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 257 276 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 282 305 IPR000163 GO:0016020
Spst2g02853 379 PRINTS Prohibitin signature 188 207 IPR000163 GO:0016020
Spst2g02853 379 SMART PHB_4 126 287 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02853 Spst-Chr2 28338511 28345907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02853 K17081 - gmx:100811958 535.798