Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02845 ATGGCTTCAAAATCTAGACCCAATCTATCTGAAAATCCCAACAAAGGATCAATGGCAACTCATAGAGTCAGTAAAGGTAGCAAAGTAGTGTCCAGATCAGAATCTGAGTCACCATCCCCTTTGCAAACTTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTGAATTCGAAGCCTACTATTGAGCGGAAATCACCAAGACCCTCCGCCACCCCACCTGATAAACAACCCCCGAGAGCTGCAAAGGGTTCAGAGTTGCAGAACCAATTGAATCTTGCACAAGAAGACCTAAAGAAAGCGAAGGAGCTGCTCATTCAGGCCGAAAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGACGCACAGACAGTGGCTGAGGAAGCAAATGGCAAACTCAGGGAAGCATTGGTGGCTCGAAAACGAGCTGAGGAGAATTCTGAGATTGAGAGGTTCCGAGCGGTGGAATTGGAACAGGCTGGTATTGAAACTGTGAAGAAGAAGGAGGAAGAATGGCAGAAAGAGATTGAAAGTATCAAGAACCAACATGCTTTGGACATGGCTGCTCTTCTCTCCACCACTCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATTACTTGTGATGCAAAGAACCAGGCATTGAATCATGCTGATGACGCAACTAAAATTGCCGAGATTCATGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTAATGCGATTGAAGGCCTTACTAGATGCAAAACTGGAAACAGAGGCTGGTGAAAATCAGGTTATATTGAAACTGAAAACAGAGATAGAAGCTCTCAACGAAGAACTTGAAAAAGCCAAGGGTTACAATGATAAGTTGTCCGAGAAAGAAACTTTTATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCTGAATCTTATACCCGTAGCCTGTTAGAGGAGTGGCATAGGAAGGTTGAGGAACTGGAAACGAGGATTGAAGACGCAAACAAACTGGAGAGATCTGCATCAGAATCTTTGGAATCGGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGAAGCAGAATCTGAAGTTAATACTCTTAAAGAGAAGGTGGGATTATTAGAAATGACAATTGGGAGACAGAGAGCTGAAGTTGAGGATTCAGAACGCCAACTTCGCACAGCCAAGGAAGAAAGTCTTGAGAAGTCAAAGGAAATTGAAGCTCTGAAATCTGAAATTGAGAAGGTCAAGGAAGAGAAAGCCCAAGCTTTGAACGATGAAAAACTTGCTGCTTCTAGTGTGCAGACCTTATTAGAAGAGAAAAACAAAATTATCAGTGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACACGAAGTATCTACAGAAGCTAGAGTAGCCAAGGAAAATCTACTAAACATTCAAGCTGAACGGGAAAGCTACGAGGCTCAGATTGAAGATTTGAAGTTAGTATTAAAAGCCACTAATGAAAAATATGAATCGATGCTCAATGAGGCACGACATGAGATTGATGTTCTTGTATGTAGTATTGAAAACTCTAAGAGTGTATTTGAGAACTCCAAGGCTGAGTGGGAGCAGAGAGAGCTTCATCTAGTCAGTTGCATAAAGAAAAATGAAGAAGAGAAGGTATCCCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACTGAGGAAGAAGCTAATATCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATTCAACTGCAGGAAGCTCTTAAGGAAGCAACAGCTGAGAACATGAAATTGAAGGAGAATTTATTAGATAAAGAAAATGAGTTGCAGAGTATGTTTCAAGAAAATGATGAACTCCGAATCAGGGAATCTGAATCTATCAAGAAGGTGGAGGAGTTATCCAAGTTGCTGGAAGAAGCTACAACCAGAAACCACAATGAGGAAAATGGAGATCTTAGTGACAGTGAGAAGGACTACGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACATGTAAGAGAGGACATTTCAAATGTAGGGCTATCAATGAATAGGAAGGAGCTCAATCAAAATGTACAGGAAGAAAGTATTCTTTCGACTGACAAGACTGAAAATGTTGCATCTCCCAAACCTCAGGAAGTGAGTGAAAAACTGAAGGAAGATGAGAGCAAAGAGAACAAAGAGAACAAAGAGAAGGATGATTCAGTAGAAGTTGAATTTAAAATGTGGGAGAGCTGTAAGATAGAGAAAAAGGAGTTCTCTCCAGAGAGAGAAGCAGAACCTGAATCATTTGAAGAGGAAGTTGACTCAAAGCTAGAAGAAGGTGGTGAGAGTTTTGATAAGATAAATGGAAATGCAGTAACAGAGAACATTGTTGAGGGTGGTGGGAGTCCTCCACCACCAAAACAACAATTGAAGAAGAAGAAGAAGCCTTTGCTTGGCAAGTTTGGAAGCCTGCTAAAAAAAAAGGGTGCAACCAACCAAAAATAA 2553 0.4078 MASKSRPNLSENPNKGSMATHRVSKGSKVVSRSESESPSPLQTSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELQNQLNLAQEDLKKAKELLIQAEKEKLKAIDELKDAQTVAEEANGKLREALVARKRAEENSEIERFRAVELEQAGIETVKKKEEEWQKEIESIKNQHALDMAALLSTTQELQRVKQELAITCDAKNQALNHADDATKIAEIHAEKAEFLSAELMRLKALLDAKLETEAGENQVILKLKTEIEALNEELEKAKGYNDKLSEKETFIEQLNVELEASKMAESYTRSLLEEWHRKVEELETRIEDANKLERSASESLESVMKQLEGSNDLLHEAESEVNTLKEKVGLLEMTIGRQRAEVEDSERQLRTAKEESLEKSKEIEALKSEIEKVKEEKAQALNDEKLAASSVQTLLEEKNKIISELENSRDEEEKSKKAMESLASALHEVSTEARVAKENLLNIQAERESYEAQIEDLKLVLKATNEKYESMLNEARHEIDVLVCSIENSKSVFENSKAEWEQRELHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVEAEAIQLQEALKEATAENMKLKENLLDKENELQSMFQENDELRIRESESIKKVEELSKLLEEATTRNHNEENGDLSDSEKDYDLLPKVVEFSEENGHVREDISNVGLSMNRKELNQNVQEESILSTDKTENVASPKPQEVSEKLKEDESKENKENKEKDDSVEVEFKMWESCKIEKKEFSPEREAEPESFEEEVDSKLEEGGESFDKINGNAVTENIVEGGGSPPPPKQQLKKKKKPLLGKFGSLLKKKGATNQK 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02845 850 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 31 844 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 771 850 - -
Spst2g02845 850 Coils Coil 648 668 - -
Spst2g02845 850 Coils Coil 550 640 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 1 64 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 1 93 - -
Spst2g02845 850 Coils Coil 311 422 - -
Spst2g02845 850 Coils Coil 465 517 - -
Spst2g02845 850 Coils Coil 259 286 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 688 759 - -
Spst2g02845 850 Coils Coil 83 145 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 734 759 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 703 731 - -
Spst2g02845 850 Coils Coil 161 181 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 780 794 - -
Spst2g02845 850 Coils Coil 430 461 - -
Spst2g02845 850 MobiDBLite consensus disorder prediction 657 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02845 Spst-Chr2 28276141 28279638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02845 - - gmx:100777446 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02845 2 28276141 28279638 Spst2g02845 2 28276141 28279638 ECH