Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02840 ATGAGAAAAACTTCAAATGTCATTGCACTCAAATTGCACCCACAACGCTACCTCTTAACAGAAGATATGAGAGTTTACCAGGACACAGTAGTTTCAGTTGATGATTCTGATGTTGTGGATCTGGTGAGAACGGTGAAAGTGAGCAACATCTCTTCAGGTACAACCGAGCAAGATTTGAGGGAATTTCTTACCTTTCCGGGAAAAATTGAACATATTGAAATGCAAGGGTTTGCCATTAATATGCAGCATATGATATCTCTCATTTTCAGTGACAAAGGAAGTCCCCAAGTCGCGTATGTTACCTTCAGTACTTCAGAGGGAGCAGAAACTGCAGTTCTTCTCTCGGGAGCAGTTGTGTCTGGACAGTCTCTGAACATAGATTTGGCTAAGGATTATGCTCTATCTACCTCGGCTACATCTGCAGCAACACAGACTAGTAGTGCTGAGAGTGAGGAATCTGGTTTGAGGAAGGCAGAGGATGTTGTATCCAGCATGCTAGCCAAGGGCTTCATTTTAGGCAAAGATGCAATGAATCGAGCAAAATCCTTTGATGAAAGGCACAGGCTCACTTCCACGGCCTCAGCAAAAGTTGCTTCTTTGGACCAGAAGGTTGGTTTTACTGAAAAGATCAGTGCTGGTACAGTTCTGGTGAATGGCAAGGTGAAACAGATGGATGAGAAATATCAAGTCTCTGAGAAGACCAAATCTGCAATTTCAGTAGCTGAGCAGTCAGTATCTAATGCTGGATCTGCCATAATGAAGAATCGCTATGTGTTGACTGGGGCTACATGGGTCACAGGTGCTTACAACAGGGTTGCTAAGGCAGCTGAGGAAGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCGCAGGATAATCAAGGAAAGACTGTAGGAGGTCAAACCACCATGTCTGAAACCGCCAAACCTGATCAAACCTTAAAACAAGAAACCACAGTTAATGAATCCTCCAAACCTGAACCTCAACAGGCCGCCACAGCTGATCAACCCTCCAAATCTGAAACTCAAGTGGCCACCACAGTTAATGAACCCTCCAAACCTGAACCTCAAGAGGCAGCCAAGGATGGTCAACCTTCCAATCCTGCAGCAAAACAAGCCTGA 1119 0.4477 MRKTSNVIALKLHPQRYLLTEDMRVYQDTVVSVDDSDVVDLVRTVKVSNISSGTTEQDLREFLTFPGKIEHIEMQGFAINMQHMISLIFSDKGSPQVAYVTFSTSEGAETAVLLSGAVVSGQSLNIDLAKDYALSTSATSAATQTSSAESEESGLRKAEDVVSSMLAKGFILGKDAMNRAKSFDERHRLTSTASAKVASLDQKVGFTEKISAGTVLVNGKVKQMDEKYQVSEKTKSAISVAEQSVSNAGSAIMKNRYVLTGATWVTGAYNRVAKAAEEVGQKTKEKVLAQDNQGKTVGGQTTMSETAKPDQTLKQETTVNESSKPEPQQAATADQPSKSETQVATTVNEPSKPEPQEAAKDGQPSNPAAKQA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02840 372 SMART rrm1_1 44 127 IPR000504 GO:0003723
Spst2g02840 372 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 43 131 IPR000504 GO:0003723
Spst2g02840 372 MobiDBLite consensus disorder prediction 293 352 - -
Spst2g02840 372 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 41 290 - -
Spst2g02840 372 SUPERFAMILY RNA-binding domain, RBD 42 132 IPR035979 GO:0003676
Spst2g02840 372 MobiDBLite consensus disorder prediction 286 372 - -
Spst2g02840 372 Gene3D - 40 159 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02840 Spst-Chr2 28250113 28254030 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02840 - - vum:124839032 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02840 2 28250113 28254030 Spst2g02840 2 28250113 28254030 ECH